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Pseudomonadales (Order)

Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;

This taxon was found in 5.88% of laboratory mice jejunum, 10.0% of laboratory mice ileum (with ≥1% threshold).

Relative abundance

Relative abundance in each sample

Sample accession Project accession Sampling location Genotype Vendor Origin Count Relative abundance (%)
ERS2716613 ERP110263 Jejunum C57BL/6 Envigo Laboratory 3388 6.20
ERS2716280 ERP110263 Ileum C57BL/6 Envigo Laboratory 783 2.43
ERS2716231 ERP110263 Ileum C57BL/6 Envigo Laboratory 308 1.79
ERS2716548 ERP110263 Jejunum C57BL/6 Envigo Laboratory 1016 1.71
ERS2716146 ERP110263 Duodenum C57BL/6 Envigo Laboratory 165 0.44
ERS2716610 ERP110263 Jejunum C57BL/6 Envigo Laboratory 187 0.40
ERS2716747 ERP110263 Stomach C57BL/6 Envigo Laboratory 138 0.39
ERS2716479 ERP110263 Jejunum C57BL/6 Envigo Laboratory 74 0.29
ERS2716345 ERP110263 Ileum C57BL/6 Envigo Laboratory 83 0.27
SRS5679046 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 10 0.25
ERS2716097 ERP110263 Duodenum C57BL/6 Envigo Laboratory 76 0.23
ERS2716119 ERP110263 Duodenum C57BL/6 Envigo Laboratory 123 0.19
SRS347319 SRP012588 Cecum CAST/EiJ The Jackson Laboratory Laboratory 51 0.18
ERS2716208 ERP110263 Duodenum C57BL/6 Envigo Laboratory 20 0.16
ERS2716566 ERP110263 Jejunum C57BL/6 Envigo Laboratory 33 0.14
ERS2716164 ERP110263 Duodenum C57BL/6 Envigo Laboratory 16 0.11
SRS5679035 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 6 0.10
SRS2719326 SRP125798 Feces C57BL/6 Charles River Laboratories Laboratory 14 0.10
ERS2716478 ERP110263 Jejunum C57BL/6 Envigo Laboratory 15 0.08
SRS347385 SRP012588 Cecum WSB/EiJ The Jackson Laboratory Laboratory 6 0.08
SRS5679025 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 3 0.07
ERS2716612 ERP110263 Jejunum C57BL/6 Envigo Laboratory 49 0.07
ERS2716682 ERP110263 Stomach C57BL/6 Envigo Laboratory 42 0.07
ERS2716666 ERP110263 Stomach C57BL/6 Envigo Laboratory 7 0.07
ERS2716480 ERP110263 Jejunum C57BL/6 Envigo Laboratory 14 0.07
ERS2715893 ERP110263 Colon C57BL/6 Envigo Laboratory 46 0.07
SRS5679030 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 2 0.06
ERS2715828 ERP110263 Colon C57BL/6 Envigo Laboratory 11 0.06
ERS2716298 ERP110263 Ileum C57BL/6 Envigo Laboratory 6 0.05
SRS2290016 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 7 0.05
SRS5679023 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 2 0.05
SRS5679031 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 2 0.05
SRS347342 SRP012588 Cecum NOD/LtJ The Jackson Laboratory Laboratory 5 0.05
ERS2716144 ERP110263 Duodenum C57BL/6 Envigo Laboratory 31 0.05
ERS2715894 ERP110263 Colon C57BL/6 Envigo Laboratory 6 0.05
SRS5679079 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 2 0.04
ERS2715892 ERP110263 Colon C57BL/6 Envigo Laboratory 20 0.04
ERS2716346 ERP110263 Ileum C57BL/6 Envigo Laboratory 18 0.04
ERS2716733 ERP110263 Stomach C57BL/6 Envigo Laboratory 9 0.03
ERS2716028 ERP110263 Cecum C57BL/6 Envigo Laboratory 19 0.03
ERS2716130 ERP110263 Duodenum C57BL/6 Envigo Laboratory 9 0.03
SRS3667894 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 16 0.03
SRS3665198 SRP157514 Cecum C57BL/6 Charles River Laboratories Laboratory 3 0.03
ERS2716108 ERP110263 Duodenum C57BL/6 Envigo Laboratory 18 0.03
ERS2716145 ERP110263 Duodenum C57BL/6 Envigo Laboratory 10 0.03
ERS2716443 ERP110263 Jejunum C57BL/6 Envigo Laboratory 2 0.02
SRS5679077 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 1 0.02
ERS2716398 ERP110263 Jejunum C57BL/6 Envigo Laboratory 10 0.02
SRS2290241 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 6 0.02
SRS347344 SRP012588 Cecum NZO/HILtJ The Jackson Laboratory Laboratory 2 0.02
SRS347318 SRP012588 Cecum CAST/EiJ The Jackson Laboratory Laboratory 2 0.02
SRS3667862 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 6 0.02
SRS5679029 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 1 0.02
ERS2716320 ERP110263 Ileum C57BL/6 Envigo Laboratory 5 0.02
SRS2529819 SRP145069 Colon C57BL/6 Janvier Labs Laboratory 4 0.02
ERS2716555 ERP110263 Jejunum C57BL/6 Envigo Laboratory 10 0.02
ERS2716681 ERP110263 Stomach C57BL/6 Envigo Laboratory 10 0.02
SRS347289 SRP012588 Cecum A/J The Jackson Laboratory Laboratory 1 0.02
ERS2716175 ERP110263 Duodenum C57BL/6 Envigo Laboratory 11 0.02
SRS1099750 SRP064488 Feces C57BL/6 The Jackson Laboratory Laboratory 2 0.02
SRS3665216 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 5 0.02
ERS2716186 ERP110263 Duodenum C57BL/6 Envigo Laboratory 3 0.02
SRS347286 SRP012588 Cecum 129S1/SvImJ The Jackson Laboratory Laboratory 2 0.02
SRS4889619 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 7 0.02
ERS2716577 ERP110263 Jejunum C57BL/6 Envigo Laboratory 7 0.02
SRS2290083 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.02
SRS2290214 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
SRS347304 SRP012588 Cecum C57BL/6 The Jackson Laboratory Laboratory 2 0.01
ERS2716680 ERP110263 Stomach C57BL/6 Envigo Laboratory 9 0.01
SRS347284 SRP012588 Cecum 129S1/SvImJ The Jackson Laboratory Laboratory 1 0.01
ERS2716614 ERP110263 Jejunum C57BL/6 Envigo Laboratory 8 0.01
ERS2716213 ERP110263 Ileum C57BL/6 Envigo Laboratory 7 0.01
SRS3665215 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 10 0.01
ERS2716476 ERP110263 Jejunum C57BL/6 Envigo Laboratory 4 0.01
SRS3665208 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 3 0.01
SRS2290102 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 5 0.01
SRS2290050 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
ERS2716079 ERP110263 Duodenum C57BL/6 Envigo Laboratory 8 0.01
ERS2716588 ERP110263 Jejunum C57BL/6 Envigo Laboratory 3 0.01
ERS2716499 ERP110263 Jejunum C57BL/6 Envigo Laboratory 8 0.01
SRS1945770 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 6 0.01
ERS2716331 ERP110263 Ileum C57BL/6 Envigo Laboratory 3 0.01
ERS2716279 ERP110263 Ileum C57BL/6 Envigo Laboratory 2 0.01
SRS3665206 SRP157514 Cecum C57BL/6 Charles River Laboratories Laboratory 2 0.01
SRS347335 SRP012588 Cecum NOD/LtJ The Jackson Laboratory Laboratory 1 0.01
ERS2716278 ERP110263 Ileum C57BL/6 Envigo Laboratory 6 0.01
SRS3665233 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 5 0.01
SRS347336 SRP012588 Cecum NOD/LtJ The Jackson Laboratory Laboratory 1 0.01
SRS2290233 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3 0.01
SRS2290234 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
SRS347311 SRP012588 Cecum C3H/Ri The Jackson Laboratory Laboratory 1 0.01
SRS2290106 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 5 0.01
SRS3665197 SRP157514 Cecum C57BL/6 Charles River Laboratories Laboratory 5 0.01
SRS347287 SRP012588 Cecum 129S1/SvImJ The Jackson Laboratory Laboratory 1 0.01
ERS2715890 ERP110263 Colon C57BL/6 Envigo Laboratory 5 0.01
SRS2290198 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
SRS2290076 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3 0.01
SRS2290204 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3 0.01
ERS2716344 ERP110263 Ileum C57BL/6 Envigo Laboratory 5 0.01
SRS876930 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.01
SRS2290243 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3 0.01
SRS3665229 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 4 0.01
SRS347362 SRP012588 Cecum PWK/PhJ The Jackson Laboratory Laboratory 1 0.01
SRS347321 SRP012588 Cecum CAST/EiJ The Jackson Laboratory Laboratory 1 0.01
SRS2529850 SRP145069 Colon C57BL/6 Janvier Labs Laboratory 2 0.01
ERS2715980 ERP110263 Cecum C57BL/6 Envigo Laboratory 4 0.01
SRS2290079 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 4 0.01
SRS3665226 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 3 0.01
ERS2716510 ERP110263 Jejunum C57BL/6 Envigo Laboratory 5 0.01
SRS3665228 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 3 0.01
SRS347386 SRP012588 Cecum WSB/EiJ The Jackson Laboratory Laboratory 1 0.01
SRS2290163 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3 0.01
SRS3665199 SRP157514 Cecum C57BL/6 Charles River Laboratories Laboratory 4 0.01
SRS2290240 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
SRS2290100 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3 0.01
SRS876873 SRP056326 Feces A/J The Jackson Laboratory Laboratory 5 0.01
SRS2290148 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.01
SRS2290244 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
SRS3665239 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 2 0.01
SRS2529845 SRP145069 Colon C57BL/6 Janvier Labs Laboratory 2 0.01
SRS2290206 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
SRS2290158 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3 0.01
SRS2290200 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
SRS3665200 SRP157514 Cecum C57BL/6 Charles River Laboratories Laboratory 2 0.01
ERS2716141 ERP110263 Duodenum C57BL/6 Envigo Laboratory 4 0.01
ERS2716027 ERP110263 Cecum C57BL/6 Envigo Laboratory 3 0.01
ERS2716197 ERP110263 Duodenum C57BL/6 Envigo Laboratory 3 0.01
SRS347323 SRP012588 Cecum CAST/EiJ The Jackson Laboratory Laboratory 1 0.01
SRS2290205 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
SRS2290201 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
SRS2290059 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
SRS2290157 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
SRS2290073 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
SRS2290078 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
SRS1872566 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 1 0.01
SRS876874 SRP056326 Feces A/J Envigo Laboratory 1 0.01
SRS2290117 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
SRS347334 SRP012588 Cecum NOD/LtJ The Jackson Laboratory Laboratory 1 0.01
ERS2716354 ERP110263 Jejunum C57BL/6 Envigo Laboratory 3 0.00
ERS2716086 ERP110263 Duodenum C57BL/6 Envigo Laboratory 3 0.00
SRS2290207 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.00
SRS2290081 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.00
SRS941317 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 1 0.00
SRS3665243 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 3 0.00
SRS2290077 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.00
SRS2290161 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.00
SRS2290202 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
ERS2716748 ERP110263 Stomach C57BL/6 Envigo Laboratory 2 0.00
SRS3667880 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 1 0.00
SRS3665241 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 3 0.00
SRS2529796 SRP145069 Colon C57BL/6 Janvier Labs Laboratory 1 0.00
SRS3665227 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 1 0.00
SRS3665219 SRP157514 Cecum C57BL/6 Charles River Laboratories Laboratory 2 0.00
SRS876872 SRP056326 Feces A/J The Jackson Laboratory Laboratory 2 0.00
ERS2716532 ERP110263 Jejunum C57BL/6 Envigo Laboratory 2 0.00
ERS2716342 ERP110263 Ileum C57BL/6 Envigo Laboratory 2 0.00
ERS2716488 ERP110263 Jejunum C57BL/6 Envigo Laboratory 2 0.00
SRS876859 SRP056326 Feces BALB/c Envigo Laboratory 2 0.00
ERS2716412 ERP110263 Jejunum C57BL/6 Envigo Laboratory 2 0.00
SRS2290203 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
SRS876880 SRP056326 Feces C57BL/6 Envigo Laboratory 2 0.00
SRS876881 SRP056326 Feces C57BL/6 Envigo Laboratory 2 0.00
SRS876916 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 2 0.00
SRS876863 SRP056326 Feces BALB/c Envigo Laboratory 2 0.00
SRS3667884 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 1 0.00
SRS2290124 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
SRS4889826 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 1 0.00
ERS2716746 ERP110263 Stomach C57BL/6 Envigo Laboratory 1 0.00
SRS876876 SRP056326 Feces A/J The Jackson Laboratory Laboratory 2 0.00
SRS4889551 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
SRS3667893 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 1 0.00
ERS2715826 ERP110263 Colon C57BL/6 Envigo Laboratory 1 0.00
SRS3665201 SRP157514 Cecum C57BL/6 Charles River Laboratories Laboratory 1 0.00
SRS1945728 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
SRS2290175 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
SRS876882 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
ERS2716744 ERP110263 Stomach C57BL/6 Envigo Laboratory 1 0.00
SRS1945730 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
ERS2716655 ERP110263 Stomach C57BL/6 Envigo Laboratory 1 0.00
ERS2716275 ERP110263 Ileum C57BL/6 Envigo Laboratory 1 0.00
SRS876787 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
SRS876821 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 1 0.00
SRS876808 SRP056326 Feces C57BL/6 Envigo Laboratory 1 0.00
ERS2716521 ERP110263 Jejunum C57BL/6 Envigo Laboratory 1 0.00
SRS876774 SRP056326 Feces A/J Envigo Laboratory 1 0.00
ERS2716633 ERP110263 Stomach C57BL/6 Envigo Laboratory 1 0.00
SRS876884 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
SRS876856 SRP056326 Feces BALB/c Envigo Laboratory 1 0.00
ERS2716481 ERP110263 Jejunum C57BL/6 Envigo Laboratory 1 0.00
SRS876879 SRP056326 Feces C57BL/6 Envigo Laboratory 1 0.00
ERS2716622 ERP110263 Stomach C57BL/6 Envigo Laboratory 1 0.00
SRS876867 SRP056326 Feces A/J Envigo Laboratory 1 0.00
SRS876870 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 1 0.00
ERS2716545 ERP110263 Jejunum C57BL/6 Envigo Laboratory 1 0.00
SRS876877 SRP056326 Feces C57BL/6 Envigo Laboratory 1 0.00
ERS2716615 ERP110263 Stomach C57BL/6 Envigo Laboratory 1 0.00
SRS876868 SRP056326 Feces A/J Envigo Laboratory 1 0.00
SRS2063201 SRP102269 Feces C57BL/6 National Laboratory Animal Center Laboratory 1 0.00
SRS3665242 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 1 0.00
SRS876935 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 1 0.00