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Summary

Project accession Sample accession Experiment accession Run accession Sampling location Genotype Vendor Origin
SRP102269 SRS2063201 SRX2661064 SRR5365767 Feces C57BL/6 National Laboratory Animal Center Laboratory
Collection date Country Sex Age Life stage Region Metadata Comment #Valid reads #kegg id
Taiwan Male 12 Adult V4 88761 9285

OTU-picking

Method Cutoff No. of OTUs found in the sample Good's coverage of library(%)
CL_OPEN_REF_UCLUST_MC2 0.97 1269 99.90

Diversity indices

ACE Chao1 Jackknife Shannon Simpson NPShannon Phylogenetic diversity
1310.39 1279.92 1360.00 4.60 0.02 4.62 754

Rarefaction curve

Rank abundance curve

Bacterial Composition