Project accession Sample accession Experiment accession Run accession Sampling location Genotype Vendor Origin
SRP157514 SRS3665226 SRX4547957 SRR7687477 Feces C57BL/6 Charles River Laboratories Laboratory
Collection date Country Sex Age Life stage Region Metadata Comment #Valid reads #kegg id
2016-02-15 Male 14 Adult V4 42395 9295


Method Cutoff No. of OTUs found in the sample Good's coverage of library(%)
CL_OPEN_REF_UCLUST_MC2 0.97 676 99.81

Diversity indices

ACE Chao1 Jackknife Shannon Simpson NPShannon Phylogenetic diversity
720.49 692.37 756.00 4.18 0.04 4.20 631

Rarefaction curve

Rank abundance curve

Bacterial Composition