Loading...

Summary

Project accession Sample accession Experiment accession Run accession Sampling location Genotype Vendor Origin
SRP098151 SRS1945728 SRX2524206 SRR5210750 Feces C57BL/6 The Jackson Laboratory Laboratory
Collection date Country Sex Age Life stage Region Metadata Comment #Valid reads #kegg id
Male 8 Adult V4 81552 9318

OTU-picking

Method Cutoff No. of OTUs found in the sample Good's coverage of library(%)
CL_OPEN_REF_UCLUST_MC2 0.97 1211 99.89

Diversity indices

ACE Chao1 Jackknife Shannon Simpson NPShannon Phylogenetic diversity
1251.14 1219.74 1298.00 3.28 0.14 3.30 719

Rarefaction curve

Rank abundance curve

Bacterial Composition