Loading...

Summary

Project accession Sample accession Experiment accession Run accession Sampling location Genotype Vendor Origin
SRP157514 SRS3665229 SRX4547960 SRR7687474 Feces C57BL/6 Charles River Laboratories Laboratory
Collection date Country Sex Age Life stage Region Metadata Comment #Valid reads #kegg id
2016-02-15 Male 14 Adult V4 56502 9122

OTU-picking

Method Cutoff No. of OTUs found in the sample Good's coverage of library(%)
CL_OPEN_REF_UCLUST_MC2 0.97 881 99.90

Diversity indices

ACE Chao1 Jackknife Shannon Simpson NPShannon Phylogenetic diversity
908.29 886.28 940.00 4.28 0.03 4.31 636

Rarefaction curve

Rank abundance curve

Bacterial Composition