Project accession Sample accession Experiment accession Run accession Sampling location Genotype Vendor Origin
SRP157514 SRS3665227 SRX4547958 SRR7687476 Feces C57BL/6 Charles River Laboratories Laboratory
Collection date Country Sex Age Life stage Region Metadata Comment #Valid reads #kegg id
2016-02-15 Male 14 Adult V4 33910 9372


Method Cutoff No. of OTUs found in the sample Good's coverage of library(%)
CL_OPEN_REF_UCLUST_MC2 0.97 551 99.75

Diversity indices

ACE Chao1 Jackknife Shannon Simpson NPShannon Phylogenetic diversity
605.48 573.56 637.00 3.99 0.04 4.02 613

Rarefaction curve

Rank abundance curve

Bacterial Composition