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Description

Laboratory mouse studies are paramount for understanding basic biological phenomena but also have limitations. These include conflicting results caused by divergent microbiota and limited translational research value. To address both shortcomings, we transferred C57BL/6 embryos into wild mice, creating "wildlings." These mice have a natural microbiota and pathogens at all body sites and the tractable genetics of C57BL/6 mice. The bacterial microbiome, mycobiome, and virome of wildlings affect the immune landscape of multiple organs. Their gut microbiota outcompete laboratory microbiota and demonstrate resilience to environmental challenges. Wildlings, but not conventional laboratory mice, phenocopied human immune responses in two preclinical studies. A combined natural microbiota- and pathogen-based model may enhance the reproducibility of biomedical studies and increase the bench-to-bedside safety and success of immunological studies.

Summary

Project accession BioProject accession Keywords PMID #Samples
SRP200540 PRJNA540893 Cecum Feces Mus musculus domesticus C57BL/6 Wild mouse Taconic Biosciences The Jackson Laboratory Wild Laboratory 31371577 72

Alpha diversity

Samples

Sample accession Project accession Sampling location Genotype Vendor Origin
SRS4889366 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild
SRS4889367 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild
SRS4889343 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild
SRS4889336 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild
SRS4889698 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild
SRS4889696 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild
SRS4889619 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild
SRS4889617 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild
SRS4889493 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory
SRS4889434 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory
SRS4889376 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory
SRS4889327 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory
SRS4889325 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory
SRS4889326 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory
SRS4889324 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory
SRS4889319 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory
SRS4889318 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory
SRS4889273 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory
SRS4889266 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory
SRS4889220 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory
SRS4889206 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory
SRS4889205 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory
SRS4889769 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory
SRS4889733 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory
SRS4889711 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory
SRS4889707 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory
SRS4889699 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory
SRS4889701 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory
SRS4889697 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory
SRS4889695 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory
SRS4889694 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory
SRS4889693 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory
SRS4889650 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory
SRS4889641 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory
SRS4889611 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory
SRS4889610 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory
SRS4889609 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory
SRS4889608 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory
SRS4889607 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory
SRS4889606 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory
SRS4889587 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory
SRS4889585 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory
SRS4889586 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory
SRS4889584 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory
SRS4889553 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory
SRS4889551 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory
SRS4889530 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory
SRS4889877 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory
SRS4889876 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory
SRS4889875 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory
SRS4889873 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory
SRS4889874 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory
SRS4889871 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory
SRS4889872 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory
SRS4889870 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory
SRS4889869 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory
SRS4889868 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory
SRS4889866 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory
SRS4889861 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory
SRS4889826 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory
SRS4889824 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory
SRS4889814 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory
SRS4889813 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory
SRS4889812 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory
SRS4889811 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory
SRS4889810 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory
SRS4889809 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory
SRS4889807 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory
SRS4889808 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory
SRS4889806 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory
SRS4889804 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory
SRS4889805 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory

Reference

Rosshart, Stephan P., et al. "Laboratory mice born to wild mice have natural microbiota and model human immune responses." Science 365.6452 (2019).