Laboratory mouse studies are paramount for understanding basic biological phenomena but also have limitations. These include conflicting results caused by divergent microbiota and limited translational research value. To address both shortcomings, we transferred C57BL/6 embryos into wild mice, creating "wildlings." These mice have a natural microbiota and pathogens at all body sites and the tractable genetics of C57BL/6 mice. The bacterial microbiome, mycobiome, and virome of wildlings affect the immune landscape of multiple organs. Their gut microbiota outcompete laboratory microbiota and demonstrate resilience to environmental challenges. Wildlings, but not conventional laboratory mice, phenocopied human immune responses in two preclinical studies. A combined natural microbiota- and pathogen-based model may enhance the reproducibility of biomedical studies and increase the bench-to-bedside safety and success of immunological studies.
Project accession | BioProject accession | Keywords | PMID | #Samples |
---|---|---|---|---|
SRP200540 | PRJNA540893 | Cecum Feces Mus musculus domesticus C57BL/6 Wild mouse Taconic Biosciences The Jackson Laboratory Wild Laboratory | 31371577 | 72 |
Sample accession | Project accession | Sampling location | Genotype | Vendor | Origin |
---|---|---|---|---|---|
SRS4889366 | SRP200540 | Cecum | Mus musculus domesticus | Wild mouse | Wild |
SRS4889367 | SRP200540 | Cecum | Mus musculus domesticus | Wild mouse | Wild |
SRS4889343 | SRP200540 | Cecum | Mus musculus domesticus | Wild mouse | Wild |
SRS4889336 | SRP200540 | Cecum | Mus musculus domesticus | Wild mouse | Wild |
SRS4889698 | SRP200540 | Cecum | Mus musculus domesticus | Wild mouse | Wild |
SRS4889696 | SRP200540 | Cecum | Mus musculus domesticus | Wild mouse | Wild |
SRS4889619 | SRP200540 | Cecum | Mus musculus domesticus | Wild mouse | Wild |
SRS4889617 | SRP200540 | Cecum | Mus musculus domesticus | Wild mouse | Wild |
SRS4889493 | SRP200540 | Feces | C57BL/6 | Taconic Biosciences | Laboratory |
SRS4889434 | SRP200540 | Feces | C57BL/6 | Taconic Biosciences | Laboratory |
SRS4889376 | SRP200540 | Feces | C57BL/6 | Taconic Biosciences | Laboratory |
SRS4889327 | SRP200540 | Feces | C57BL/6 | Taconic Biosciences | Laboratory |
SRS4889325 | SRP200540 | Feces | C57BL/6 | Taconic Biosciences | Laboratory |
SRS4889326 | SRP200540 | Feces | C57BL/6 | Taconic Biosciences | Laboratory |
SRS4889324 | SRP200540 | Feces | C57BL/6 | Taconic Biosciences | Laboratory |
SRS4889319 | SRP200540 | Feces | C57BL/6 | Taconic Biosciences | Laboratory |
SRS4889318 | SRP200540 | Feces | C57BL/6 | Taconic Biosciences | Laboratory |
SRS4889273 | SRP200540 | Feces | C57BL/6 | The Jackson Laboratory | Laboratory |
SRS4889266 | SRP200540 | Feces | C57BL/6 | The Jackson Laboratory | Laboratory |
SRS4889220 | SRP200540 | Feces | C57BL/6 | The Jackson Laboratory | Laboratory |
SRS4889206 | SRP200540 | Feces | C57BL/6 | The Jackson Laboratory | Laboratory |
SRS4889205 | SRP200540 | Feces | C57BL/6 | The Jackson Laboratory | Laboratory |
SRS4889769 | SRP200540 | Feces | C57BL/6 | Taconic Biosciences | Laboratory |
SRS4889733 | SRP200540 | Feces | C57BL/6 | The Jackson Laboratory | Laboratory |
SRS4889711 | SRP200540 | Feces | C57BL/6 | Taconic Biosciences | Laboratory |
SRS4889707 | SRP200540 | Feces | C57BL/6 | Taconic Biosciences | Laboratory |
SRS4889699 | SRP200540 | Feces | C57BL/6 | Taconic Biosciences | Laboratory |
SRS4889701 | SRP200540 | Feces | C57BL/6 | Taconic Biosciences | Laboratory |
SRS4889697 | SRP200540 | Feces | C57BL/6 | Taconic Biosciences | Laboratory |
SRS4889695 | SRP200540 | Feces | C57BL/6 | Taconic Biosciences | Laboratory |
SRS4889694 | SRP200540 | Feces | C57BL/6 | Taconic Biosciences | Laboratory |
SRS4889693 | SRP200540 | Feces | C57BL/6 | Taconic Biosciences | Laboratory |
SRS4889650 | SRP200540 | Feces | C57BL/6 | Taconic Biosciences | Laboratory |
SRS4889641 | SRP200540 | Feces | C57BL/6 | Taconic Biosciences | Laboratory |
SRS4889611 | SRP200540 | Feces | C57BL/6 | The Jackson Laboratory | Laboratory |
SRS4889610 | SRP200540 | Feces | C57BL/6 | The Jackson Laboratory | Laboratory |
SRS4889609 | SRP200540 | Feces | C57BL/6 | The Jackson Laboratory | Laboratory |
SRS4889608 | SRP200540 | Feces | C57BL/6 | The Jackson Laboratory | Laboratory |
SRS4889607 | SRP200540 | Feces | C57BL/6 | The Jackson Laboratory | Laboratory |
SRS4889606 | SRP200540 | Feces | C57BL/6 | The Jackson Laboratory | Laboratory |
SRS4889587 | SRP200540 | Feces | C57BL/6 | The Jackson Laboratory | Laboratory |
SRS4889585 | SRP200540 | Feces | C57BL/6 | The Jackson Laboratory | Laboratory |
SRS4889586 | SRP200540 | Feces | C57BL/6 | The Jackson Laboratory | Laboratory |
SRS4889584 | SRP200540 | Feces | C57BL/6 | The Jackson Laboratory | Laboratory |
SRS4889553 | SRP200540 | Feces | C57BL/6 | The Jackson Laboratory | Laboratory |
SRS4889551 | SRP200540 | Feces | C57BL/6 | The Jackson Laboratory | Laboratory |
SRS4889530 | SRP200540 | Feces | C57BL/6 | The Jackson Laboratory | Laboratory |
SRS4889877 | SRP200540 | Feces | C57BL/6 | Taconic Biosciences | Laboratory |
SRS4889876 | SRP200540 | Feces | C57BL/6 | Taconic Biosciences | Laboratory |
SRS4889875 | SRP200540 | Feces | C57BL/6 | Taconic Biosciences | Laboratory |
SRS4889873 | SRP200540 | Feces | C57BL/6 | Taconic Biosciences | Laboratory |
SRS4889874 | SRP200540 | Feces | C57BL/6 | Taconic Biosciences | Laboratory |
SRS4889871 | SRP200540 | Feces | C57BL/6 | Taconic Biosciences | Laboratory |
SRS4889872 | SRP200540 | Feces | C57BL/6 | Taconic Biosciences | Laboratory |
SRS4889870 | SRP200540 | Feces | C57BL/6 | Taconic Biosciences | Laboratory |
SRS4889869 | SRP200540 | Feces | C57BL/6 | Taconic Biosciences | Laboratory |
SRS4889868 | SRP200540 | Feces | C57BL/6 | Taconic Biosciences | Laboratory |
SRS4889866 | SRP200540 | Feces | C57BL/6 | The Jackson Laboratory | Laboratory |
SRS4889861 | SRP200540 | Feces | C57BL/6 | The Jackson Laboratory | Laboratory |
SRS4889826 | SRP200540 | Feces | C57BL/6 | Taconic Biosciences | Laboratory |
SRS4889824 | SRP200540 | Feces | C57BL/6 | Taconic Biosciences | Laboratory |
SRS4889814 | SRP200540 | Feces | C57BL/6 | Taconic Biosciences | Laboratory |
SRS4889813 | SRP200540 | Feces | C57BL/6 | The Jackson Laboratory | Laboratory |
SRS4889812 | SRP200540 | Feces | C57BL/6 | The Jackson Laboratory | Laboratory |
SRS4889811 | SRP200540 | Feces | C57BL/6 | Taconic Biosciences | Laboratory |
SRS4889810 | SRP200540 | Feces | C57BL/6 | The Jackson Laboratory | Laboratory |
SRS4889809 | SRP200540 | Feces | C57BL/6 | The Jackson Laboratory | Laboratory |
SRS4889807 | SRP200540 | Feces | C57BL/6 | The Jackson Laboratory | Laboratory |
SRS4889808 | SRP200540 | Feces | C57BL/6 | The Jackson Laboratory | Laboratory |
SRS4889806 | SRP200540 | Feces | C57BL/6 | The Jackson Laboratory | Laboratory |
SRS4889804 | SRP200540 | Feces | C57BL/6 | The Jackson Laboratory | Laboratory |
SRS4889805 | SRP200540 | Feces | C57BL/6 | The Jackson Laboratory | Laboratory |
Rosshart, Stephan P., et al. "Laboratory mice born to wild mice have natural microbiota and model human immune responses." Science 365.6452 (2019).