Project accession Sample accession Experiment accession Run accession Sampling location Genotype Vendor Origin
SRP200540 SRS4889824 SRX5984129 SRR9213320 Feces C57BL/6 Taconic Biosciences Laboratory
Collection date Country Sex Age Life stage Region Metadata Comment #Valid reads #kegg id
USA Female V4 4943 8579


Method Cutoff No. of OTUs found in the sample Good's coverage of library(%)
CL_OPEN_REF_UCLUST_MC2 0.97 311 98.42

Diversity indices

ACE Chao1 Jackknife Shannon Simpson NPShannon Phylogenetic diversity
375.83 388.00 411.35 4.60 0.02 4.65 514

Rarefaction curve

Rank abundance curve

Bacterial Composition