Project accession Sample accession Experiment accession Run accession Sampling location Genotype Vendor Origin
SRP230331 SRS5679035 SRX7172367 SRR10482698 Cecum C57BL/6 Charles River Laboratories Laboratory
Collection date Country Sex Age Life stage Region Metadata Comment #Valid reads #kegg id
Female V4 6019 8650


Method Cutoff No. of OTUs found in the sample Good's coverage of library(%)
CL_OPEN_REF_UCLUST_MC2 0.97 260 99.20

Diversity indices

ACE Chao1 Jackknife Shannon Simpson NPShannon Phylogenetic diversity
293.41 300.29 310.72 4.32 0.03 4.35 425

Rarefaction curve

Rank abundance curve

Bacterial Composition