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PAC001544_s (Species)

Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; PAC001544_g; PAC001544_s;

This taxon was found in 4.67% of laboratory mice cecum, 3.19% of laboratory mice feces, 1.02% of wild mice ileocecum (with ≥1% threshold).

Relative abundance

Relative abundance in each sample

Sample accession Project accession Sampling location Genotype Vendor Origin Count Relative abundance (%)
SRS347306 SRP012588 Cecum C3H/Ri The Jackson Laboratory Laboratory 849 10.15
SRS347307 SRP012588 Cecum C3H/Ri The Jackson Laboratory Laboratory 444 7.36
SRS347309 SRP012588 Cecum C3H/Ri The Jackson Laboratory Laboratory 266 4.95
SRS2290058 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 472 3.72
SRS4889870 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 792 2.48
SRS4889324 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 786 2.20
SRS4889872 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 893 2.14
SRS347305 SRP012588 Cecum C3H/Ri The Jackson Laboratory Laboratory 181 2.07
SRS1872567 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 338 2.03
SRS941317 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 419 1.96
SRS4889325 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 802 1.93
SRS347314 SRP012588 Cecum C3H/Ri The Jackson Laboratory Laboratory 151 1.85
SRS4889699 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 521 1.59
SRS4889876 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 416 1.54
SRS347311 SRP012588 Cecum C3H/Ri The Jackson Laboratory Laboratory 154 1.47
SRS347312 SRP012588 Cecum C3H/Ri The Jackson Laboratory Laboratory 79 1.45
SRS4889694 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 670 1.35
SRS4889693 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 411 1.24
SRS4889877 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 396 1.12
SRS4889874 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 745 1.11
SRS4889698 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 284 0.95
SRS2290105 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 190 0.94
SRS2529797 SRP145069 Colon C57BL/6 Janvier Labs Laboratory 233 0.90
SRS4889697 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 302 0.89
SRS4889327 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 537 0.82
SRS4889875 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 280 0.79
SRS2290212 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 97 0.74
SRS347308 SRP012588 Cecum C3H/Ri The Jackson Laboratory Laboratory 142 0.66
SRS2529792 SRP145069 Colon C57BL/6 Janvier Labs Laboratory 151 0.62
SRS876809 SRP056326 Feces C57BL/6 Envigo Laboratory 391 0.61
SRS2529794 SRP145069 Colon C57BL/6 Janvier Labs Laboratory 186 0.61
SRS2290107 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 70 0.59
SRS941681 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 175 0.59
SRS4889696 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 325 0.58
SRS5679046 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 21 0.54
SRS4889869 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 158 0.47
SRS2529800 SRP145069 Colon C57BL/6 Janvier Labs Laboratory 126 0.45
SRS2290202 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 106 0.44
SRS4889326 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 155 0.43
SRS4889873 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 104 0.41
SRS4889367 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 158 0.40
SRS941143 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 84 0.36
SRS2529843 SRP145069 Colon C57BL/6 Janvier Labs Laboratory 110 0.35
SRS2290208 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 37 0.33
SRS940678 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 95 0.33
SRS2290078 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 117 0.32
SRS876822 SRP056326 Feces BALB/c Envigo Laboratory 186 0.32
SRS4889871 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 114 0.29
SRS876806 SRP056326 Feces C57BL/6 Envigo Laboratory 158 0.26
SRS1872587 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 48 0.26
SRS2529842 SRP145069 Colon C57BL/6 Janvier Labs Laboratory 66 0.24
SRS5679032 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 7 0.22
SRS2529796 SRP145069 Colon C57BL/6 Janvier Labs Laboratory 61 0.22
SRS5679033 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 5 0.22
SRS5679078 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 8 0.21
SRS876903 SRP056326 Feces C57BL/6 Envigo Laboratory 98 0.19
SRS4889868 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 57 0.18
SRS4889695 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 63 0.16
SRS876867 SRP056326 Feces A/J Envigo Laboratory 101 0.15
SRS5679034 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 7 0.15
SRS347310 SRP012588 Cecum C3H/Ri The Jackson Laboratory Laboratory 16 0.15
SRS2529798 SRP145069 Colon C57BL/6 Janvier Labs Laboratory 39 0.15
SRS2529850 SRP145069 Colon C57BL/6 Janvier Labs Laboratory 35 0.14
SRS2290059 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 46 0.13
SRS2529848 SRP145069 Colon C57BL/6 Janvier Labs Laboratory 32 0.13
SRS2529795 SRP145069 Colon C57BL/6 Janvier Labs Laboratory 49 0.13
SRS876840 SRP056326 Feces C57BL/6 Envigo Laboratory 65 0.12
SRS2290061 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 12 0.10
SRS2529790 SRP145069 Colon C57BL/6 Janvier Labs Laboratory 19 0.09
SRS941212 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 23 0.08
SRS2290204 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 28 0.08
SRS941318 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 27 0.08
SRS2529849 SRP145069 Colon C57BL/6 Janvier Labs Laboratory 23 0.08
SRS1872584 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 15 0.07
SRS2529847 SRP145069 Colon C57BL/6 Janvier Labs Laboratory 22 0.07
SRS876856 SRP056326 Feces BALB/c Envigo Laboratory 44 0.07
SRS2529846 SRP145069 Colon C57BL/6 Janvier Labs Laboratory 24 0.06
SRS2529819 SRP145069 Colon C57BL/6 Janvier Labs Laboratory 12 0.06
SRS4889366 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 27 0.06
SRS4889619 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 22 0.05
SRS940871 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 6 0.05
SRS940649 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 8 0.04
SRS2529799 SRP145069 Colon C57BL/6 Janvier Labs Laboratory 8 0.03
SRS2290100 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 13 0.03
SRS2529845 SRP145069 Colon C57BL/6 Janvier Labs Laboratory 9 0.03
SRS2290023 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 4 0.03
SRS1872570 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 5 0.03
SRS1872576 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 5 0.03
SRS5679025 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 1 0.02
ERS2716613 ERP110263 Jejunum C57BL/6 Envigo Laboratory 13 0.02
SRS2290239 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3 0.02
SRS2290016 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3 0.02
SRS2290216 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3 0.02
SRS941670 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 5 0.02
SRS876808 SRP056326 Feces C57BL/6 Envigo Laboratory 11 0.02
SRS4889707 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 5 0.02
SRS2290074 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.02
SRS2290200 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 5 0.02
ERS2716145 ERP110263 Duodenum C57BL/6 Envigo Laboratory 6 0.02
SRS876768 SRP056326 Feces BALB/c Envigo Laboratory 9 0.02
ERS2715857 ERP110263 Colon C57BL/6 Envigo Laboratory 3 0.01
SRS2290014 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
SRS2290055 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
SRS1872589 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 2 0.01
ERS2716612 ERP110263 Jejunum C57BL/6 Envigo Laboratory 7 0.01
SRS1872571 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 2 0.01
SRS940859 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 3 0.01
SRS2290121 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.01
SRS2290198 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
ERS2715902 ERP110263 Cecum C57BL/6 Envigo Laboratory 5 0.01
SRS2290119 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.01
SRS2529852 SRP145069 Colon C57BL/6 Janvier Labs Laboratory 2 0.01
SRS2290244 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
ERS2715969 ERP110263 Cecum C57BL/6 Envigo Laboratory 4 0.01
SRS876843 SRP056326 Feces C57BL/6 Envigo Laboratory 4 0.01
SRS2290101 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.01
SRS2290233 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
ERS2715835 ERP110263 Colon C57BL/6 Envigo Laboratory 3 0.01
SRS2290201 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
ERS2715768 ERP110263 Colon C57BL/6 Envigo Laboratory 4 0.01
SRS2290076 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
SRS1872572 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 1 0.01
ERS2716279 ERP110263 Ileum C57BL/6 Envigo Laboratory 1 0.01
SRS2290243 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
ERS2716146 ERP110263 Duodenum C57BL/6 Envigo Laboratory 2 0.01
SRS4889701 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 2 0.01
SRS4889807 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory 2 0.01
SRS1872566 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 1 0.01
SRS2290117 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
ERS2716309 ERP110263 Ileum C57BL/6 Envigo Laboratory 2 0.00
SRS876952 SRP056326 Feces C57BL/6 Envigo Laboratory 3 0.00
SRS1872565 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 1 0.00
ERS2716622 ERP110263 Stomach C57BL/6 Envigo Laboratory 3 0.00
SRS2290238 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
ERS2715868 ERP110263 Colon C57BL/6 Envigo Laboratory 2 0.00
ERS2716577 ERP110263 Jejunum C57BL/6 Envigo Laboratory 2 0.00
SRS2290075 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.00
SRS876877 SRP056326 Feces C57BL/6 Envigo Laboratory 3 0.00
ERS2716024 ERP110263 Cecum C57BL/6 Envigo Laboratory 2 0.00
SRS4889587 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
SRS4889607 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
SRS2290079 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.00
SRS4889376 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 1 0.00
SRS4889650 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 1 0.00
ERS2716548 ERP110263 Jejunum C57BL/6 Envigo Laboratory 2 0.00
SRS2290206 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
ERS2716476 ERP110263 Jejunum C57BL/6 Envigo Laboratory 1 0.00
SRS876814 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 2 0.00
SRS876823 SRP056326 Feces BALB/c Envigo Laboratory 2 0.00
SRS876852 SRP056326 Feces A/J Envigo Laboratory 2 0.00
SRS4889810 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
SRS876807 SRP056326 Feces C57BL/6 Envigo Laboratory 2 0.00
ERS2716143 ERP110263 Duodenum C57BL/6 Envigo Laboratory 2 0.00
SRS876850 SRP056326 Feces A/J The Jackson Laboratory Laboratory 2 0.00
SRS2290205 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
ERS2715924 ERP110263 Cecum C57BL/6 Envigo Laboratory 2 0.00
SRS4889811 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 1 0.00
SRS2290124 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
ERS2716746 ERP110263 Stomach C57BL/6 Envigo Laboratory 1 0.00
SRS2290081 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
SRS2290077 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
ERS2715895 ERP110263 Cecum C57BL/6 Envigo Laboratory 1 0.00
SRS4889617 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 1 0.00
ERS2716027 ERP110263 Cecum C57BL/6 Envigo Laboratory 1 0.00
ERS2715790 ERP110263 Colon C57BL/6 Envigo Laboratory 1 0.00
SRS2290106 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
ERS2716655 ERP110263 Stomach C57BL/6 Envigo Laboratory 1 0.00
SRS876844 SRP056326 Feces C57BL/6 Envigo Laboratory 1 0.00
SRS876779 SRP056326 Feces A/J The Jackson Laboratory Laboratory 1 0.00
SRS876833 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
SRS876846 SRP056326 Feces A/J The Jackson Laboratory Laboratory 1 0.00
ERS2715913 ERP110263 Cecum C57BL/6 Envigo Laboratory 1 0.00
SRS876884 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
ERS2716644 ERP110263 Stomach C57BL/6 Envigo Laboratory 1 0.00
SRS876831 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
ERS2716144 ERP110263 Duodenum C57BL/6 Envigo Laboratory 1 0.00
SRS876828 SRP056326 Feces BALB/c Envigo Laboratory 1 0.00
SRS876861 SRP056326 Feces A/J Envigo Laboratory 1 0.00
SRS876957 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 1 0.00
SRS876834 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
ERS2715779 ERP110263 Colon C57BL/6 Envigo Laboratory 1 0.00
SRS876815 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 1 0.00
SRS876853 SRP056326 Feces A/J Envigo Laboratory 1 0.00
SRS876849 SRP056326 Feces A/J The Jackson Laboratory Laboratory 1 0.00