Project accession Sample accession Experiment accession Run accession Sampling location Genotype Vendor Origin
SRP058488 SRS941143 SRX1033577 SRR2033354 Feces C57BL/6 Charles River Laboratories Laboratory
Collection date Country Sex Age Life stage Region Metadata Comment #Valid reads #kegg id
2014-05-17 Male Adult V4 35263 9203


Method Cutoff No. of OTUs found in the sample Good's coverage of library(%)
CL_OPEN_REF_UCLUST_MC2 0.97 920 99.77

Diversity indices

ACE Chao1 Jackknife Shannon Simpson NPShannon Phylogenetic diversity
960.78 930.64 1000.00 4.77 0.02 4.80 844

Rarefaction curve

Rank abundance curve

Bacterial Composition