Project accession Sample accession Experiment accession Run accession Sampling location Genotype Vendor Origin
SRP058488 SRS941681 SRX1034169 SRR2033960 Feces C57BL/6 Charles River Laboratories Laboratory
Collection date Country Sex Age Life stage Region Metadata Comment #Valid reads #kegg id
2014-06-04 Male Adult V4 45665 9237


Method Cutoff No. of OTUs found in the sample Good's coverage of library(%)
CL_OPEN_REF_UCLUST_MC2 0.97 835 99.83

Diversity indices

ACE Chao1 Jackknife Shannon Simpson NPShannon Phylogenetic diversity
877.12 846.80 912.00 3.75 0.12 3.77 784

Rarefaction curve

Rank abundance curve

Bacterial Composition