Project accession | Sample accession | Experiment accession | Run accession | Sampling location | Genotype | Vendor | Origin |
---|---|---|---|---|---|---|---|
SRP058488 | SRS941681 | SRX1034169 | SRR2033960 | Feces | C57BL/6 | Charles River Laboratories | Laboratory |
Collection date | Country | Sex | Age | Life stage | Region | Metadata | Comment | #Valid reads | #kegg id |
---|---|---|---|---|---|---|---|---|---|
2014-06-04 | Male | Adult | V4 | 45665 | 9237 |
Method | Cutoff | No. of OTUs found in the sample | Good's coverage of library(%) |
---|---|---|---|
CL_OPEN_REF_UCLUST_MC2 | 0.97 | 835 | 99.83 |
ACE | Chao1 | Jackknife | Shannon | Simpson | NPShannon | Phylogenetic diversity |
---|---|---|---|---|---|---|
877.12 | 846.80 | 912.00 | 3.75 | 0.12 | 3.77 | 784 |