Project accession | Sample accession | Experiment accession | Run accession | Sampling location | Genotype | Vendor | Origin |
---|---|---|---|---|---|---|---|
SRP058488 | SRS940649 | SRX1033040 | SRR2032809 | Feces | C57BL/6 | Charles River Laboratories | Laboratory |
Collection date | Country | Sex | Age | Life stage | Region | Metadata | Comment | #Valid reads | #kegg id |
---|---|---|---|---|---|---|---|---|---|
2014-05-01 | Male | Adult | V4 | 34604 | 9402 |
Method | Cutoff | No. of OTUs found in the sample | Good's coverage of library(%) |
---|---|---|---|
CL_OPEN_REF_UCLUST_MC2 | 0.97 | 831 | 99.76 |
ACE | Chao1 | Jackknife | Shannon | Simpson | NPShannon | Phylogenetic diversity |
---|---|---|---|---|---|---|
877.03 | 845.63 | 913.00 | 4.18 | 0.08 | 4.21 | 776 |