Project accession Sample accession Experiment accession Run accession Sampling location Genotype Vendor Origin
SRP058488 SRS941318 SRX1033800 SRR2033564 Feces C57BL/6 Charles River Laboratories Laboratory
Collection date Country Sex Age Life stage Region Metadata Comment #Valid reads #kegg id
2014-05-26 Male Adult V4 58931 9318


Method Cutoff No. of OTUs found in the sample Good's coverage of library(%)
CL_OPEN_REF_UCLUST_MC2 0.97 785 99.86

Diversity indices

ACE Chao1 Jackknife Shannon Simpson NPShannon Phylogenetic diversity
828.93 798.62 865.00 2.94 0.22 2.96 753

Rarefaction curve

Rank abundance curve

Bacterial Composition