Project accession Sample accession Experiment accession Run accession Sampling location Genotype Vendor Origin
SRP058488 SRS940871 SRX1033310 SRR2033079 Feces C57BL/6 Charles River Laboratories Laboratory
Collection date Country Sex Age Life stage Region Metadata Comment #Valid reads #kegg id
2014-05-10 Male Adult V4 19598 8974


Method Cutoff No. of OTUs found in the sample Good's coverage of library(%)
CL_OPEN_REF_UCLUST_MC2 0.97 683 99.57

Diversity indices

ACE Chao1 Jackknife Shannon Simpson NPShannon Phylogenetic diversity
729.28 700.97 767.00 4.21 0.05 4.25 709

Rarefaction curve

Rank abundance curve

Bacterial Composition