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Summary

Project accession Sample accession Experiment accession Run accession Sampling location Genotype Vendor Origin
SRP095440 SRS1872584 SRX2437999 SRR5122985 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory
Collection date Country Sex Age Life stage Region Metadata Comment #Valid reads #kegg id
2015-07-13 China Male 8 Adult V4 27931 8784

OTU-picking

Method Cutoff No. of OTUs found in the sample Good's coverage of library(%)
CL_OPEN_REF_UCLUST_MC2 0.97 591 99.60

Diversity indices

ACE Chao1 Jackknife Shannon Simpson NPShannon Phylogenetic diversity
664.91 652.05 702.00 4.15 0.04 4.18 774

Rarefaction curve

Rank abundance curve

Bacterial Composition