Loading...

Summary

Project accession Sample accession Experiment accession Run accession Sampling location Genotype Vendor Origin
SRP058488 SRS941670 SRX1034158 SRR2033939 Feces C57BL/6 Charles River Laboratories Laboratory
Collection date Country Sex Age Life stage Region Metadata Comment #Valid reads #kegg id
2014-06-03 Male Adult V4 43407 9078

OTU-picking

Method Cutoff No. of OTUs found in the sample Good's coverage of library(%)
CL_OPEN_REF_UCLUST_MC2 0.97 710 99.81

Diversity indices

ACE Chao1 Jackknife Shannon Simpson NPShannon Phylogenetic diversity
759.29 727.30 792.00 3.21 0.15 3.24 764

Rarefaction curve

Rank abundance curve

Bacterial Composition