Project accession | Sample accession | Experiment accession | Run accession | Sampling location | Genotype | Vendor | Origin |
---|---|---|---|---|---|---|---|
SRP058488 | SRS940678 | SRX1033072 | SRR2032811 | Feces | C57BL/6 | Charles River Laboratories | Laboratory |
Collection date | Country | Sex | Age | Life stage | Region | Metadata | Comment | #Valid reads | #kegg id |
---|---|---|---|---|---|---|---|---|---|
2014-05-02 | Male | Adult | V4 | 45415 | 9407 |
Method | Cutoff | No. of OTUs found in the sample | Good's coverage of library(%) |
---|---|---|---|
CL_OPEN_REF_UCLUST_MC2 | 0.97 | 1007 | 99.80 |
ACE | Chao1 | Jackknife | Shannon | Simpson | NPShannon | Phylogenetic diversity |
---|---|---|---|---|---|---|
1058.25 | 1020.62 | 1100.00 | 4.36 | 0.06 | 4.40 | 850 |