Project accession | Sample accession | Experiment accession | Run accession | Sampling location | Genotype | Vendor | Origin |
---|---|---|---|---|---|---|---|
SRP058488 | SRS941212 | SRX1033682 | SRR2033464 | Feces | C57BL/6 | Charles River Laboratories | Laboratory |
Collection date | Country | Sex | Age | Life stage | Region | Metadata | Comment | #Valid reads | #kegg id |
---|---|---|---|---|---|---|---|---|---|
2014-05-18 | Male | Adult | V4 | 42617 | 9256 |
Method | Cutoff | No. of OTUs found in the sample | Good's coverage of library(%) |
---|---|---|---|
CL_OPEN_REF_UCLUST_MC2 | 0.97 | 889 | 99.78 |
ACE | Chao1 | Jackknife | Shannon | Simpson | NPShannon | Phylogenetic diversity |
---|---|---|---|---|---|---|
941.83 | 906.48 | 983.00 | 3.98 | 0.09 | 4.01 | 847 |