Project accession Sample accession Experiment accession Run accession Sampling location Genotype Vendor Origin
SRP058488 SRS941212 SRX1033682 SRR2033464 Feces C57BL/6 Charles River Laboratories Laboratory
Collection date Country Sex Age Life stage Region Metadata Comment #Valid reads #kegg id
2014-05-18 Male Adult V4 42617 9256


Method Cutoff No. of OTUs found in the sample Good's coverage of library(%)
CL_OPEN_REF_UCLUST_MC2 0.97 889 99.78

Diversity indices

ACE Chao1 Jackknife Shannon Simpson NPShannon Phylogenetic diversity
941.83 906.48 983.00 3.98 0.09 4.01 847

Rarefaction curve

Rank abundance curve

Bacterial Composition