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Summary

Project accession Sample accession Experiment accession Run accession Sampling location Genotype Vendor Origin
SRP095440 SRS1872571 SRX2437985 SRR5122971 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory
Collection date Country Sex Age Life stage Region Metadata Comment #Valid reads #kegg id
2015-07-18 China Male 8 Adult V4 27487 9459

OTU-picking

Method Cutoff No. of OTUs found in the sample Good's coverage of library(%)
CL_OPEN_REF_UCLUST_MC2 0.97 627 99.56

Diversity indices

ACE Chao1 Jackknife Shannon Simpson NPShannon Phylogenetic diversity
717.50 681.59 748.00 4.35 0.03 4.38 814

Rarefaction curve

Rank abundance curve

Bacterial Composition