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PAC001504_s (Species)

Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; KE159538_g; PAC001504_s;

This taxon was found in 1.06% of laboratory mice feces, 13.27% of wild mice ileocecum, 25.0% of wild mice cecum (with ≥1% threshold).

Relative abundance

Relative abundance in each sample

Sample accession Project accession Sampling location Genotype Vendor Origin Count Relative abundance (%)
SRS2290096 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 886 5.97
SRS2290079 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2945 5.96
SRS4889336 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 2291 5.16
SRS876892 SRP056326 Feces A/J Envigo Laboratory 1848 2.66
SRS876857 SRP056326 Feces A/J Envigo Laboratory 1710 2.56
SRS2290084 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 269 2.09
SRS2290243 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 732 2.05
SRS2290211 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 278 1.94
SRS2290237 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 199 1.89
SRS2290077 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 854 1.78
SRS2290031 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 213 1.55
SRS941317 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 294 1.37
SRS2290101 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 198 1.31
SRS2290167 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 171 1.29
SRS2290214 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 159 1.19
SRS4889617 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 565 1.16
SRS2290072 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 145 1.14
SRS2290086 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 102 1.08
SRS876799 SRP056326 Feces A/J Envigo Laboratory 677 1.00
SRS2290105 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 201 0.99
SRS2290024 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 114 0.99
SRS876862 SRP056326 Feces A/J Envigo Laboratory 601 0.90
SRS2290074 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 107 0.87
SRS2290078 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 275 0.75
SRS2290023 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 77 0.57
SRS2290205 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 145 0.42
SRS876858 SRP056326 Feces A/J Envigo Laboratory 280 0.38
SRS876798 SRP056326 Feces A/J Envigo Laboratory 242 0.34
SRS2290233 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 90 0.29
SRS940678 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 84 0.29
SRS2290165 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 25 0.26
SRS4889824 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 9 0.25
SRS876893 SRP056326 Feces A/J Envigo Laboratory 167 0.25
ERS1069635 ERP014408 Feces C57BL/6 Envigo Laboratory 112 0.22
SRS2290241 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 50 0.17
SRS941212 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 36 0.13
SRS2290059 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 42 0.12
SRS2290164 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 17 0.12
SRS2290239 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 15 0.12
SRS876800 SRP056326 Feces A/J Envigo Laboratory 76 0.11
SRS5679032 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 3 0.10
SRS4889698 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 28 0.09
SRS4889343 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 25 0.09
SRS876801 SRP056326 Feces A/J Envigo Laboratory 58 0.08
SRS2290075 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 35 0.08
SRS2290198 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 15 0.07
SRS2290208 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 7 0.06
SRS876860 SRP056326 Feces A/J Envigo Laboratory 42 0.06
SRS2290058 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 7 0.06
SRS2290216 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 6 0.04
SRS2290102 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 12 0.03
SRS2290100 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 8 0.02
SRS2290209 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.02
SRS4889696 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 11 0.02
SRS940649 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 4 0.02
SRS2290117 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 7 0.02
SRS2290021 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.02
SRS941143 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 4 0.02
SRS347322 SRP012588 Cecum CAST/EiJ The Jackson Laboratory Laboratory 1 0.02
SRS2290212 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.02
SRS2290014 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
SRS2290238 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3 0.01
SRS1945769 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 8 0.01
SRS876942 SRP056326 Feces A/J Envigo Laboratory 8 0.01
SRS347385 SRP012588 Cecum WSB/EiJ The Jackson Laboratory Laboratory 1 0.01
SRS2290202 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3 0.01
SRS2290073 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 4 0.01
SRS876925 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 7 0.01
SRS940859 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 3 0.01
SRS2290162 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
SRS876819 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 7 0.01
SRS2290234 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
SRS876924 SRP056326 Feces A/J The Jackson Laboratory Laboratory 3 0.01
SRS2290121 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.01
SRS1945734 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 5 0.01
SRS4889619 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 4 0.01
SRS1945727 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 5 0.01
SRS876916 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 6 0.01
SRS2290204 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3 0.01
SRS876869 SRP056326 Feces A/J Envigo Laboratory 6 0.01
SRS3667874 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 3 0.01
SRS3667864 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 3 0.01
SRS876922 SRP056326 Feces A/J The Jackson Laboratory Laboratory 4 0.01
SRS940871 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 1 0.01
SRS2290099 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.01
SRS2290104 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.01
SRS4889812 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory 2 0.01
SRS876875 SRP056326 Feces A/J The Jackson Laboratory Laboratory 5 0.01
SRS876845 SRP056326 Feces A/J The Jackson Laboratory Laboratory 4 0.01
SRS876777 SRP056326 Feces A/J Envigo Laboratory 5 0.01
SRS2290160 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.01
SRS876872 SRP056326 Feces A/J The Jackson Laboratory Laboratory 4 0.01
SRS2290052 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.01
SRS4889808 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory 2 0.01
SRS876778 SRP056326 Feces A/J Envigo Laboratory 4 0.01
SRS876832 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 4 0.01
SRS941681 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 2 0.01
SRS876915 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 3 0.01
SRS876921 SRP056326 Feces A/J Envigo Laboratory 3 0.01
SRS4889810 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory 2 0.01
SRS876816 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 4 0.01
SRS876901 SRP056326 Feces C57BL/6 Envigo Laboratory 3 0.01
SRS876896 SRP056326 Feces A/J Envigo Laboratory 4 0.01
ERS2716013 ERP110263 Cecum C57BL/6 Envigo Laboratory 2 0.01
SRS2290076 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
SRS4889609 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory 2 0.01
SRS876934 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 4 0.01
SRS876882 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 3 0.01
SRS876943 SRP056326 Feces A/J Envigo Laboratory 3 0.01
SRS876815 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 4 0.01
ERS2715902 ERP110263 Cecum C57BL/6 Envigo Laboratory 3 0.01
SRS876898 SRP056326 Feces A/J The Jackson Laboratory Laboratory 4 0.01
SRS3667866 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 2 0.01
SRS876859 SRP056326 Feces BALB/c Envigo Laboratory 3 0.01
SRS876830 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 3 0.01
SRS876833 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 3 0.01
SRS876806 SRP056326 Feces C57BL/6 Envigo Laboratory 3 0.00
SRS1872584 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 1 0.00
SRS876846 SRP056326 Feces A/J The Jackson Laboratory Laboratory 3 0.00
SRS876807 SRP056326 Feces C57BL/6 Envigo Laboratory 3 0.00
SRS876923 SRP056326 Feces A/J The Jackson Laboratory Laboratory 3 0.00
SRS876897 SRP056326 Feces A/J The Jackson Laboratory Laboratory 3 0.00
SRS876935 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 4 0.00
SRS4889366 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 2 0.00
SRS876891 SRP056326 Feces A/J Envigo Laboratory 3 0.00
SRS2063201 SRP102269 Feces C57BL/6 National Laboratory Animal Center Laboratory 3 0.00
SRS876927 SRP056326 Feces C57BL/6 Envigo Laboratory 3 0.00
SRS876855 SRP056326 Feces A/J The Jackson Laboratory Laboratory 3 0.00
SRS3667907 SRP157514 Cecum C57BL/6 Charles River Laboratories Laboratory 1 0.00
SRS4889607 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
SRS876847 SRP056326 Feces A/J The Jackson Laboratory Laboratory 2 0.00
SRS876902 SRP056326 Feces C57BL/6 Envigo Laboratory 2 0.00
SRS4889873 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 1 0.00
SRS876835 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 3 0.00
SRS876789 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 2 0.00
SRS876776 SRP056326 Feces A/J The Jackson Laboratory Laboratory 2 0.00
SRS876871 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 3 0.00
SRS1945774 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 2 0.00
SRS876844 SRP056326 Feces C57BL/6 Envigo Laboratory 2 0.00
SRS876878 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 2 0.00
SRS876904 SRP056326 Feces C57BL/6 Envigo Laboratory 2 0.00
ERS2715969 ERP110263 Cecum C57BL/6 Envigo Laboratory 2 0.00
SRS876843 SRP056326 Feces C57BL/6 Envigo Laboratory 2 0.00
SRS876822 SRP056326 Feces BALB/c Envigo Laboratory 2 0.00
SRS2290206 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
SRS876814 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 2 0.00
SRS876885 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 2 0.00
SRS876852 SRP056326 Feces A/J Envigo Laboratory 2 0.00
SRS876781 SRP056326 Feces A/J The Jackson Laboratory Laboratory 2 0.00
SRS876809 SRP056326 Feces C57BL/6 Envigo Laboratory 2 0.00
SRS876775 SRP056326 Feces A/J Envigo Laboratory 2 0.00
SRS876831 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 2 0.00
SRS876788 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 2 0.00
ERS2715768 ERP110263 Colon C57BL/6 Envigo Laboratory 2 0.00
SRS2290203 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
SRS876946 SRP056326 Feces A/J The Jackson Laboratory Laboratory 2 0.00
SRS876828 SRP056326 Feces BALB/c Envigo Laboratory 2 0.00
SRS876803 SRP056326 Feces A/J The Jackson Laboratory Laboratory 2 0.00
SRS876771 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 2 0.00
SRS876773 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 2 0.00
SRS876933 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 2 0.00
SRS876850 SRP056326 Feces A/J The Jackson Laboratory Laboratory 2 0.00
SRS876861 SRP056326 Feces A/J Envigo Laboratory 2 0.00
ERS2715959 ERP110263 Cecum C57BL/6 Envigo Laboratory 2 0.00
SRS3667853 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 1 0.00
SRS876802 SRP056326 Feces A/J The Jackson Laboratory Laboratory 2 0.00
SRS876772 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 2 0.00
SRS3667875 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 1 0.00
SRS876834 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 2 0.00
SRS876851 SRP056326 Feces A/J The Jackson Laboratory Laboratory 2 0.00
SRS4889811 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 1 0.00
SRS2290163 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
SRS876797 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 2 0.00
SRS876947 SRP056326 Feces A/J The Jackson Laboratory Laboratory 2 0.00
SRS2290207 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
SRS876794 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 2 0.00
SRS3667890 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 1 0.00
SRS876900 SRP056326 Feces A/J The Jackson Laboratory Laboratory 2 0.00
SRS876836 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
ERS2715868 ERP110263 Colon C57BL/6 Envigo Laboratory 1 0.00
SRS1945773 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
SRS2290161 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
SRS4889694 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 1 0.00
SRS2290106 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
SRS1945728 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
SRS876903 SRP056326 Feces C57BL/6 Envigo Laboratory 1 0.00
SRS876791 SRP056326 Feces BALB/c Envigo Laboratory 1 0.00
SRS2290175 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
SRS3667894 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 1 0.00
ERS2715960 ERP110263 Cecum C57BL/6 Envigo Laboratory 1 0.00
SRS876827 SRP056326 Feces BALB/c Envigo Laboratory 1 0.00
SRS1945732 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
SRS876841 SRP056326 Feces C57BL/6 Envigo Laboratory 1 0.00
SRS876768 SRP056326 Feces BALB/c Envigo Laboratory 1 0.00
SRS2063210 SRP102269 Feces C57BL/6 National Laboratory Animal Center Laboratory 1 0.00
SRS876787 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
SRS876786 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
SRS876779 SRP056326 Feces A/J The Jackson Laboratory Laboratory 1 0.00
SRS876829 SRP056326 Feces BALB/c Envigo Laboratory 1 0.00
SRS876792 SRP056326 Feces BALB/c Envigo Laboratory 1 0.00
SRS876883 SRP056326 Feces BALB/c Envigo Laboratory 1 0.00
SRS876848 SRP056326 Feces A/J The Jackson Laboratory Laboratory 1 0.00
ERS2716838 ERP110263 Feces C57BL/6 Envigo Laboratory 1 0.00
SRS876926 SRP056326 Feces C57BL/6 Envigo Laboratory 1 0.00
SRS876826 SRP056326 Feces BALB/c Envigo Laboratory 1 0.00
SRS876952 SRP056326 Feces C57BL/6 Envigo Laboratory 1 0.00
SRS876945 SRP056326 Feces A/J The Jackson Laboratory Laboratory 1 0.00
SRS876825 SRP056326 Feces BALB/c Envigo Laboratory 1 0.00
SRS876887 SRP056326 Feces BALB/c Envigo Laboratory 1 0.00
SRS876824 SRP056326 Feces BALB/c Envigo Laboratory 1 0.00
ERS2716644 ERP110263 Stomach C57BL/6 Envigo Laboratory 1 0.00
ERS2715957 ERP110263 Cecum C57BL/6 Envigo Laboratory 1 0.00
SRS876854 SRP056326 Feces A/J Envigo Laboratory 1 0.00
SRS876870 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 1 0.00
SRS876877 SRP056326 Feces C57BL/6 Envigo Laboratory 1 0.00
ERS2715924 ERP110263 Cecum C57BL/6 Envigo Laboratory 1 0.00
SRS876868 SRP056326 Feces A/J Envigo Laboratory 1 0.00
SRS876805 SRP056326 Feces A/J The Jackson Laboratory Laboratory 1 0.00
SRS876863 SRP056326 Feces BALB/c Envigo Laboratory 1 0.00
SRS876917 SRP056326 Feces A/J Envigo Laboratory 1 0.00
SRS3665242 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 1 0.00
SRS3665215 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 1 0.00
SRS876813 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
SRS876905 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
SRS876907 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
SRS876908 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
SRS876849 SRP056326 Feces A/J The Jackson Laboratory Laboratory 1 0.00
SRS3665241 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 1 0.00
SRS876940 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 1 0.00
SRS876895 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 1 0.00
SRS876889 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 1 0.00