Project accession Sample accession Experiment accession Run accession Sampling location Genotype Vendor Origin
SRP056326 SRS876946 SRX959637 SRR1919362 Feces A/J The Jackson Laboratory Laboratory
Collection date Country Sex Age Life stage Region Metadata Comment #Valid reads #kegg id
2013-04-10 USA Female 3 Juveniles V4 83803 8298


Method Cutoff No. of OTUs found in the sample Good's coverage of library(%)
CL_OPEN_REF_UCLUST_MC2 0.97 793 99.92

Diversity indices

ACE Chao1 Jackknife Shannon Simpson NPShannon Phylogenetic diversity
826.68 802.37 859.00 3.85 0.06 3.86 605

Rarefaction curve

Rank abundance curve

Bacterial Composition