Summary
| Project accession |
Sample accession |
Experiment accession |
Run accession |
Sampling location |
Genotype |
Vendor |
Origin |
| ERP014408 |
ERS1069635 |
ERX1369835 |
ERR1298503 |
Feces |
C57BL/6 |
Envigo |
Laboratory |
| Collection date |
Country |
Sex |
Age |
Life stage |
Region |
Metadata |
Comment |
#Valid reads |
#kegg id |
| 2014-10-22 |
Korea |
Male |
50 |
Adult |
V4 |
|
|
71355 |
9056 |
OTU-picking
| Method |
Cutoff |
No. of OTUs found in the sample |
Good's coverage of library(%) |
| CL_OPEN_REF_UCLUST_MC2 |
0.97 |
2335 |
99.93 |
Diversity indices
| ACE |
Chao1 |
Jackknife |
Shannon |
Simpson |
NPShannon |
Phylogenetic diversity |
| 2353.28 |
2336.09 |
2385.00 |
4.85 |
0.02 |
4.91 |
665 |
Rarefaction curve
Rank abundance curve
Bacterial Composition
