Project accession Sample accession Experiment accession Run accession Sampling location Genotype Vendor Origin
SRP056326 SRS876773 SRX959810 SRR1919535 Feces BALB/c The Jackson Laboratory Laboratory
Collection date Country Sex Age Life stage Region Metadata Comment #Valid reads #kegg id
2013-09-04 USA Female 24 Adult V4 81690 8450


Method Cutoff No. of OTUs found in the sample Good's coverage of library(%)
CL_OPEN_REF_UCLUST_MC2 0.97 641 99.90

Diversity indices

ACE Chao1 Jackknife Shannon Simpson NPShannon Phylogenetic diversity
689.81 657.45 722.00 3.41 0.11 3.43 527

Rarefaction curve

Rank abundance curve

Bacterial Composition