Project accession Sample accession Experiment accession Run accession Sampling location Genotype Vendor Origin
SRP056326 SRS876794 SRX959787 SRR1919512 Feces BALB/c The Jackson Laboratory Laboratory
Collection date Country Sex Age Life stage Region Metadata Comment #Valid reads #kegg id
2013-09-04 USA Female 24 Adult V4 82833 8659


Method Cutoff No. of OTUs found in the sample Good's coverage of library(%)
CL_OPEN_REF_UCLUST_MC2 0.97 701 99.92

Diversity indices

ACE Chao1 Jackknife Shannon Simpson NPShannon Phylogenetic diversity
737.80 711.33 768.00 3.32 0.13 3.33 603

Rarefaction curve

Rank abundance curve

Bacterial Composition