Summary
| Project accession |
Sample accession |
Experiment accession |
Run accession |
Sampling location |
Genotype |
Vendor |
Origin |
| SRP098151 |
SRS1945769 |
SRX2524247 |
SRR5210791 |
Feces |
C57BL/6 |
The Jackson Laboratory |
Laboratory |
| Collection date |
Country |
Sex |
Age |
Life stage |
Region |
Metadata |
Comment |
#Valid reads |
#kegg id |
|
|
Male |
5 |
Juveniles |
V4 |
|
|
88198 |
8498 |
OTU-picking
| Method |
Cutoff |
No. of OTUs found in the sample |
Good's coverage of library(%) |
| CL_OPEN_REF_UCLUST_MC2 |
0.97 |
991 |
99.90 |
Diversity indices
| ACE |
Chao1 |
Jackknife |
Shannon |
Simpson |
NPShannon |
Phylogenetic diversity |
| 1032.28 |
1002.99 |
1078.00 |
2.94 |
0.17 |
2.96 |
665 |
Rarefaction curve
Rank abundance curve
Bacterial Composition
