PAC002478_s

PAC002478_s (Species)

Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; LT706945_g; PAC002478_s;

This taxon was found in 50.0% of laboratory mice colon, 0.8% of laboratory mice feces, 85.71% of wild mice ileocecum, 75.0% of wild mice cecum (with ≥1% threshold).

Relative abundance

Relative abundance in each sample

Sample accession	Project accession	Sampling location	Genotype	Vendor	Origin	Count	Relative abundance (%)
SRS2529792	SRP145069	Colon	C57BL/6	Janvier Labs	Laboratory	10292	42.00
SRS2529800	SRP145069	Colon	C57BL/6	Janvier Labs	Laboratory	10100	36.16
SRS2529793	SRP145069	Colon	C57BL/6	Janvier Labs	Laboratory	5476	25.01
SRS2529794	SRP145069	Colon	C57BL/6	Janvier Labs	Laboratory	7187	23.40
SRS2529796	SRP145069	Colon	C57BL/6	Janvier Labs	Laboratory	6086	22.01
SRS2529790	SRP145069	Colon	C57BL/6	Janvier Labs	Laboratory	4120	20.12
SRS2529797	SRP145069	Colon	C57BL/6	Janvier Labs	Laboratory	5058	19.48
SRS2290208	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	1863	16.68
SRS2290241	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	4583	15.72
SRS2290217	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	2517	15.50
SRS2290238	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	3185	14.82
SRS2290096	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	1923	12.95
SRS2529850	SRP145069	Colon	C57BL/6	Janvier Labs	Laboratory	2982	12.16
SRS2529799	SRP145069	Colon	C57BL/6	Janvier Labs	Laboratory	2695	11.16
SRS2290051	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	1280	10.77
SRS2290204	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	3648	10.55
SRS2529845	SRP145069	Colon	C57BL/6	Janvier Labs	Laboratory	3044	10.48
SRS2529795	SRP145069	Colon	C57BL/6	Janvier Labs	Laboratory	3854	10.06
SRS2290101	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	1525	10.05
SRS2290057	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	993	9.73
SRS2290233	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	2887	9.29
SRS2290242	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	944	8.96
SRS2290209	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	882	8.70
SRS2529842	SRP145069	Colon	C57BL/6	Janvier Labs	Laboratory	2389	8.59
SRS2290020	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	1164	7.67
SRS2290215	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	678	7.61
SRS2290206	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	2165	7.31
SRS2529798	SRP145069	Colon	C57BL/6	Janvier Labs	Laboratory	1901	7.08
SRS2290160	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	978	6.94
SRS2290052	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	988	6.80
SRS2529848	SRP145069	Colon	C57BL/6	Janvier Labs	Laboratory	1659	6.75
SRS2290076	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	2296	6.74
SRS2290078	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	2414	6.61
SRS2290202	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	1552	6.41
SRS2290210	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	667	6.10
SRS2290213	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	655	6.05
SRS2290039	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	874	5.99
SRS2290201	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	1946	5.98
SRS2290165	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	528	5.59
SRS2290053	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	501	5.41
SRS2290093	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	791	5.19
SRS2290021	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	495	4.53
SRS2290237	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	472	4.48
SRS2290023	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	599	4.44
SRS2529852	SRP145069	Colon	C57BL/6	Janvier Labs	Laboratory	1096	4.44
SRS2290014	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	613	4.43
SRS2290061	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	547	4.38
SRS2290198	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	974	4.37
SRS2290049	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	369	4.36
SRS2290107	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	513	4.34
SRS2290239	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	552	4.34
SRS2529849	SRP145069	Colon	C57BL/6	Janvier Labs	Laboratory	1303	4.32
SRS2290121	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	449	4.29
SRS2290019	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	527	4.11
SRS2290103	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	463	4.08
SRS2529846	SRP145069	Colon	C57BL/6	Janvier Labs	Laboratory	1613	4.07
SRS2290205	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	1388	4.01
SRS2290216	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	567	3.93
SRS2290203	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	1282	3.90
SRS2290085	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	459	3.83
SRS2290048	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	480	3.76
SRS2529843	SRP145069	Colon	C57BL/6	Janvier Labs	Laboratory	1186	3.76
SRS2290099	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	488	3.72
SRS2290214	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	464	3.46
SRS2290211	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	491	3.43
SRS2290148	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	479	3.43
SRS2290167	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	447	3.38
SRS2290084	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	430	3.35
SRS2290212	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	428	3.24
SRS2290016	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	411	3.23
SRS2290136	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	345	3.01
SRS2290086	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	277	2.95
SRS2290162	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	560	2.86
SRS2290163	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	1079	2.75
SRS2290140	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	497	2.70
SRS2290018	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	385	2.69
SRS2290207	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	1027	2.48
SRS2290119	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	281	2.46
SRS2290077	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	1158	2.42
SRS4889343	SRP200540	Cecum	Mus musculus domesticus	Wild mouse	Wild	703	2.40
SRS2290079	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	1143	2.31
SRS4889698	SRP200540	Cecum	Mus musculus domesticus	Wild mouse	Wild	687	2.30
SRS2290081	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	941	2.25
SRS2290072	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	270	2.13
SRS4889366	SRP200540	Cecum	Mus musculus domesticus	Wild mouse	Wild	961	2.09
SRS2290056	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	199	2.08
SRS2290024	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	239	2.07
SRS2290073	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	738	2.07
SRS2290159	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	245	2.06
SRS2529847	SRP145069	Colon	C57BL/6	Janvier Labs	Laboratory	620	2.00
SRS2290082	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	222	1.93
SRS2290161	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	942	1.92
SRS2290157	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	661	1.92
SRS2290102	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	750	1.92
SRS2529819	SRP145069	Colon	C57BL/6	Janvier Labs	Laboratory	374	1.87
SRS2290104	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	241	1.82
SRS4889336	SRP200540	Cecum	Mus musculus domesticus	Wild mouse	Wild	803	1.81
SRS2290243	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	636	1.78
SRS4889696	SRP200540	Cecum	Mus musculus domesticus	Wild mouse	Wild	959	1.72
SRS2290075	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	746	1.65
SRS2290175	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	878	1.64
SRS2290240	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	408	1.53
SRS2290055	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	226	1.52
SRS2290244	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	428	1.52
SRS2290117	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	554	1.45
SRS2063201	SRP102269	Feces	C57BL/6	National Laboratory Animal Center	Laboratory	970	1.39
SRS2290164	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	192	1.36
SRS2290074	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	165	1.35
SRS2290058	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	170	1.34
SRS2290017	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	179	1.32
SRS4889824	SRP200540	Feces	C57BL/6	Taconic Biosciences	Laboratory	46	1.28
SRS2063205	SRP102269	Feces	C57BL/6	National Laboratory Animal Center	Laboratory	767	1.18
SRS4889617	SRP200540	Cecum	Mus musculus domesticus	Wild mouse	Wild	486	1.00
SRS2290200	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	283	0.91
SRS2290158	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	407	0.91
SRS2063203	SRP102269	Feces	C57BL/6	National Laboratory Animal Center	Laboratory	478	0.79
SRS2290100	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	249	0.62
SRS2063199	SRP102269	Feces	C57BL/6	National Laboratory Animal Center	Laboratory	384	0.62
SRS2063210	SRP102269	Feces	C57BL/6	National Laboratory Animal Center	Laboratory	326	0.57
SRS1872586	SRP095440	Feces	C57BL/6	Shanghai Laboratory Animal Center	Laboratory	120	0.57
SRS1872567	SRP095440	Feces	C57BL/6	Shanghai Laboratory Animal Center	Laboratory	92	0.55
SRS2063211	SRP102269	Feces	C57BL/6	National Laboratory Animal Center	Laboratory	110	0.51
SRS2290234	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	86	0.41
SRS1872600	SRP095440	Feces	C57BL/6	Shanghai Laboratory Animal Center	Laboratory	59	0.36
SRS1872579	SRP095440	Feces	C57BL/6	Shanghai Laboratory Animal Center	Laboratory	73	0.34
SRS2063208	SRP102269	Feces	C57BL/6	National Laboratory Animal Center	Laboratory	193	0.33
SRS1872589	SRP095440	Feces	C57BL/6	Shanghai Laboratory Animal Center	Laboratory	48	0.29
SRS1872568	SRP095440	Feces	C57BL/6	Shanghai Laboratory Animal Center	Laboratory	46	0.25
SRS1872596	SRP095440	Feces	C57BL/6	Shanghai Laboratory Animal Center	Laboratory	46	0.25
SRS2290059	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	85	0.24
SRS1872569	SRP095440	Feces	C57BL/6	Shanghai Laboratory Animal Center	Laboratory	34	0.20
SRS1872573	SRP095440	Feces	C57BL/6	Shanghai Laboratory Animal Center	Laboratory	32	0.18
SRS1872576	SRP095440	Feces	C57BL/6	Shanghai Laboratory Animal Center	Laboratory	35	0.18
SRS2290124	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	54	0.14
SRS1872571	SRP095440	Feces	C57BL/6	Shanghai Laboratory Animal Center	Laboratory	21	0.11
SRS1872570	SRP095440	Feces	C57BL/6	Shanghai Laboratory Animal Center	Laboratory	16	0.09
SRS1872597	SRP095440	Feces	C57BL/6	Shanghai Laboratory Animal Center	Laboratory	15	0.09
SRS1872580	SRP095440	Feces	C57BL/6	Shanghai Laboratory Animal Center	Laboratory	17	0.08
SRS2290083	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	9	0.07
SRS1872587	SRP095440	Feces	C57BL/6	Shanghai Laboratory Animal Center	Laboratory	12	0.06
SRS1872572	SRP095440	Feces	C57BL/6	Shanghai Laboratory Animal Center	Laboratory	11	0.06
SRS1872584	SRP095440	Feces	C57BL/6	Shanghai Laboratory Animal Center	Laboratory	12	0.06
SRS1872566	SRP095440	Feces	C57BL/6	Shanghai Laboratory Animal Center	Laboratory	10	0.05
SRS1872588	SRP095440	Feces	C57BL/6	Shanghai Laboratory Animal Center	Laboratory	8	0.04
SRS2290134	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	4	0.03
SRS1872565	SRP095440	Feces	C57BL/6	Shanghai Laboratory Animal Center	Laboratory	5	0.02
SRS4889814	SRP200540	Feces	C57BL/6	Taconic Biosciences	Laboratory	7	0.02
SRS2290105	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	3	0.01
SRS2290015	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	1	0.01
SRS4889619	SRP200540	Cecum	Mus musculus domesticus	Wild mouse	Wild	4	0.01
SRS3667862	SRP157514	Feces	C57BL/6	Charles River Laboratories	Laboratory	2	0.01
SRS2290050	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	1	0.01
SRS4889697	SRP200540	Feces	C57BL/6	Taconic Biosciences	Laboratory	2	0.01
SRS3667874	SRP157514	Feces	C57BL/6	Charles River Laboratories	Laboratory	2	0.01
SRS4889811	SRP200540	Feces	C57BL/6	Taconic Biosciences	Laboratory	2	0.01
SRS4889367	SRP200540	Cecum	Mus musculus domesticus	Wild mouse	Wild	2	0.01
SRS3667880	SRP157514	Feces	C57BL/6	Charles River Laboratories	Laboratory	1	0.00
SRS3667850	SRP157514	Feces	C57BL/6	Charles River Laboratories	Laboratory	1	0.00
SRS3667905	SRP157514	Cecum	C57BL/6	Charles River Laboratories	Laboratory	1	0.00
SRS3667852	SRP157514	Feces	C57BL/6	Charles River Laboratories	Laboratory	1	0.00
SRS4889870	SRP200540	Feces	C57BL/6	Taconic Biosciences	Laboratory	1	0.00
SRS4889693	SRP200540	Feces	C57BL/6	Taconic Biosciences	Laboratory	1	0.00
SRS3667900	SRP157514	Cecum	C57BL/6	Charles River Laboratories	Laboratory	1	0.00
SRS4889869	SRP200540	Feces	C57BL/6	Taconic Biosciences	Laboratory	1	0.00
SRS3667851	SRP157514	Feces	C57BL/6	Charles River Laboratories	Laboratory	1	0.00
SRS4889324	SRP200540	Feces	C57BL/6	Taconic Biosciences	Laboratory	1	0.00
ERS2716146	ERP110263	Duodenum	C57BL/6	Envigo	Laboratory	1	0.00
SRS3667864	SRP157514	Feces	C57BL/6	Charles River Laboratories	Laboratory	1	0.00
SRS4889205	SRP200540	Feces	C57BL/6	The Jackson Laboratory	Laboratory	1	0.00
SRS3667885	SRP157514	Feces	C57BL/6	Charles River Laboratories	Laboratory	1	0.00
SRS3667882	SRP157514	Feces	C57BL/6	Charles River Laboratories	Laboratory	1	0.00
SRS4889325	SRP200540	Feces	C57BL/6	Taconic Biosciences	Laboratory	1	0.00
SRS3667902	SRP157514	Cecum	C57BL/6	Charles River Laboratories	Laboratory	1	0.00
SRS3667894	SRP157514	Feces	C57BL/6	Charles River Laboratories	Laboratory	1	0.00
SRS4889874	SRP200540	Feces	C57BL/6	Taconic Biosciences	Laboratory	1	0.00
SRS876934	SRP056326	Feces	C57BL/6	The Jackson Laboratory	Laboratory	1	0.00