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Summary

Project accession Sample accession Experiment accession Run accession Sampling location Genotype Vendor Origin
SRP102269 SRS2063211 SRX2661074 SRR5365777 Feces C57BL/6 National Laboratory Animal Center Laboratory
Collection date Country Sex Age Life stage Region Metadata Comment #Valid reads #kegg id
Taiwan Male 24 Adult V4 31245 8797

OTU-picking

Method Cutoff No. of OTUs found in the sample Good's coverage of library(%)
CL_OPEN_REF_UCLUST_MC2 0.97 571 99.72

Diversity indices

ACE Chao1 Jackknife Shannon Simpson NPShannon Phylogenetic diversity
621.45 596.74 657.00 3.79 0.07 3.82 566

Rarefaction curve

Rank abundance curve

Bacterial Composition