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Summary

Project accession Sample accession Experiment accession Run accession Sampling location Genotype Vendor Origin
SRP095440 SRS1872600 SRX2438014 SRR5123000 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory
Collection date Country Sex Age Life stage Region Metadata Comment #Valid reads #kegg id
2015-07-20 China Male 8 Adult V4 22742 8926

OTU-picking

Method Cutoff No. of OTUs found in the sample Good's coverage of library(%)
CL_OPEN_REF_UCLUST_MC2 0.97 552 99.53

Diversity indices

ACE Chao1 Jackknife Shannon Simpson NPShannon Phylogenetic diversity
626.44 609.97 658.00 4.24 0.05 4.27 753

Rarefaction curve

Rank abundance curve

Bacterial Composition