Project accession Sample accession Experiment accession Run accession Sampling location Genotype Vendor Origin
SRP095440 SRS1872588 SRX2438002 SRR5122988 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory
Collection date Country Sex Age Life stage Region Metadata Comment #Valid reads #kegg id
2015-07-20 China Male 8 Adult V4 25646 8639


Method Cutoff No. of OTUs found in the sample Good's coverage of library(%)
CL_OPEN_REF_UCLUST_MC2 0.97 405 99.65

Diversity indices

ACE Chao1 Jackknife Shannon Simpson NPShannon Phylogenetic diversity
486.22 461.10 496.00 3.47 0.10 3.50 566

Rarefaction curve

Rank abundance curve

Bacterial Composition