Loading...

Summary

Project accession Sample accession Experiment accession Run accession Sampling location Genotype Vendor Origin
SRP095440 SRS1872596 SRX2438010 SRR5122996 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory
Collection date Country Sex Age Life stage Region Metadata Comment #Valid reads #kegg id
2015-07-18 China Male 8 Adult V4 25837 8586

OTU-picking

Method Cutoff No. of OTUs found in the sample Good's coverage of library(%)
CL_OPEN_REF_UCLUST_MC2 0.97 394 99.76

Diversity indices

ACE Chao1 Jackknife Shannon Simpson NPShannon Phylogenetic diversity
439.54 425.02 455.00 4.04 0.06 4.06 563

Rarefaction curve

Rank abundance curve

Bacterial Composition