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PAC001105_s (Species)

Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; PAC001105_g; PAC001105_s;

This taxon was found in 0.27% of laboratory mice feces, 2.04% of wild mice ileocecum, 37.5% of wild mice cecum (with ≥1% threshold).

Relative abundance

Relative abundance in each sample

Sample accession Project accession Sampling location Genotype Vendor Origin Count Relative abundance (%)
SRS876856 SRP056326 Feces BALB/c Envigo Laboratory 1946 3.06
SRS4889367 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 1024 2.62
SRS2290158 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 721 1.62
SRS2290211 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 201 1.41
SRS4889619 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 554 1.26
SRS4889696 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 631 1.13
SRS2290081 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 272 0.65
SRS876822 SRP056326 Feces BALB/c Envigo Laboratory 306 0.52
SRS2290107 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 52 0.44
SRS2290239 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 49 0.38
SRS2290243 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 126 0.35
SRS2290100 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 122 0.30
SRS2290072 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 35 0.28
SRS2290059 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 82 0.24
SRS2290213 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 23 0.21
SRS2290119 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 23 0.20
SRS5679026 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 9 0.18
SRS2290053 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 15 0.16
SRS940871 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 20 0.15
SRS4889617 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 63 0.13
ERS2715801 ERP110263 Colon C57BL/6 Envigo Laboratory 54 0.10
ERS2715868 ERP110263 Colon C57BL/6 Envigo Laboratory 37 0.08
SRS2290103 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 9 0.08
SRS4889366 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 36 0.08
SRS2290099 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 8 0.06
ERS2716002 ERP110263 Cecum C57BL/6 Envigo Laboratory 14 0.06
SRS2290101 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 9 0.06
SRS2290208 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 6 0.05
ERS2716144 ERP110263 Duodenum C57BL/6 Envigo Laboratory 30 0.05
ERS2716655 ERP110263 Stomach C57BL/6 Envigo Laboratory 24 0.04
SRS5679034 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 2 0.04
SRS2290204 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 14 0.04
SRS4889698 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 11 0.04
ERS2716722 ERP110263 Stomach C57BL/6 Envigo Laboratory 15 0.04
ERS2716013 ERP110263 Cecum C57BL/6 Envigo Laboratory 12 0.04
SRS4889343 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 10 0.03
ERS2715935 ERP110263 Cecum C57BL/6 Envigo Laboratory 21 0.03
ERS2716130 ERP110263 Duodenum C57BL/6 Envigo Laboratory 9 0.03
ERS2715913 ERP110263 Cecum C57BL/6 Envigo Laboratory 18 0.03
SRS2290202 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 7 0.03
SRS4889824 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 1 0.03
SRS2290073 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 9 0.03
ERS2716231 ERP110263 Ileum C57BL/6 Envigo Laboratory 4 0.02
ERS2715846 ERP110263 Colon C57BL/6 Envigo Laboratory 11 0.02
ERS2715946 ERP110263 Cecum C57BL/6 Envigo Laboratory 14 0.02
SRS2290237 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.02
SRS2290124 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 7 0.02
SRS2290198 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 4 0.02
ERS2716610 ERP110263 Jejunum C57BL/6 Envigo Laboratory 8 0.02
ERS2715969 ERP110263 Cecum C57BL/6 Envigo Laboratory 10 0.02
ERS2715902 ERP110263 Cecum C57BL/6 Envigo Laboratory 9 0.02
ERS2715924 ERP110263 Cecum C57BL/6 Envigo Laboratory 11 0.02
SRS2290212 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.02
SRS941670 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 4 0.02
ERS2715857 ERP110263 Colon C57BL/6 Envigo Laboratory 3 0.01
ERS2716309 ERP110263 Ileum C57BL/6 Envigo Laboratory 6 0.01
SRS2290205 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 5 0.01
SRS940678 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 4 0.01
SRS2290039 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
SRS4889336 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 6 0.01
ERS2716633 ERP110263 Stomach C57BL/6 Envigo Laboratory 8 0.01
SRS2290200 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 4 0.01
SRS1872600 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 2 0.01
SRS2290203 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 4 0.01
ERS2716186 ERP110263 Duodenum C57BL/6 Envigo Laboratory 2 0.01
ERS2716841 ERP110263 Feces C57BL/6 Envigo Laboratory 7 0.01
SRS1872584 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 2 0.01
ERS2716622 ERP110263 Stomach C57BL/6 Envigo Laboratory 6 0.01
ERS2715768 ERP110263 Colon C57BL/6 Envigo Laboratory 6 0.01
ERS2716566 ERP110263 Jejunum C57BL/6 Envigo Laboratory 2 0.01
ERS2715835 ERP110263 Colon C57BL/6 Envigo Laboratory 4 0.01
SRS2290078 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3 0.01
ERS2715980 ERP110263 Cecum C57BL/6 Envigo Laboratory 4 0.01
ERS2716119 ERP110263 Duodenum C57BL/6 Envigo Laboratory 5 0.01
SRS941212 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 2 0.01
SRS2290216 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.01
ERS2716548 ERP110263 Jejunum C57BL/6 Envigo Laboratory 4 0.01
ERS2716141 ERP110263 Duodenum C57BL/6 Envigo Laboratory 4 0.01
SRS1872589 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 1 0.01
ERS2716689 ERP110263 Stomach C57BL/6 Envigo Laboratory 3 0.01
SRS941318 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 2 0.01
ERS2715779 ERP110263 Colon C57BL/6 Envigo Laboratory 4 0.01
SRS1872568 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 1 0.01
SRS3667904 SRP157514 Cecum C57BL/6 Charles River Laboratories Laboratory 2 0.00
SRS940649 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 1 0.00
SRS876802 SRP056326 Feces A/J The Jackson Laboratory Laboratory 3 0.00
SRS941143 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 1 0.00
SRS876847 SRP056326 Feces A/J The Jackson Laboratory Laboratory 2 0.00
SRS3665197 SRP157514 Cecum C57BL/6 Charles River Laboratories Laboratory 2 0.00
SRS876793 SRP056326 Feces BALB/c Envigo Laboratory 2 0.00
SRS876840 SRP056326 Feces C57BL/6 Envigo Laboratory 2 0.00
ERS2715890 ERP110263 Colon C57BL/6 Envigo Laboratory 2 0.00
SRS876768 SRP056326 Feces BALB/c Envigo Laboratory 2 0.00
ERS2716700 ERP110263 Stomach C57BL/6 Envigo Laboratory 2 0.00
SRS876779 SRP056326 Feces A/J The Jackson Laboratory Laboratory 2 0.00
SRS876769 SRP056326 Feces BALB/c Envigo Laboratory 2 0.00
ERS2716387 ERP110263 Jejunum C57BL/6 Envigo Laboratory 2 0.00
SRS876778 SRP056326 Feces A/J Envigo Laboratory 2 0.00
SRS876814 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 2 0.00
SRS876806 SRP056326 Feces C57BL/6 Envigo Laboratory 2 0.00
SRS876846 SRP056326 Feces A/J The Jackson Laboratory Laboratory 2 0.00
ERS2716644 ERP110263 Stomach C57BL/6 Envigo Laboratory 2 0.00
SRS876809 SRP056326 Feces C57BL/6 Envigo Laboratory 2 0.00
ERS2716612 ERP110263 Jejunum C57BL/6 Envigo Laboratory 2 0.00
SRS876788 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 2 0.00
SRS876828 SRP056326 Feces BALB/c Envigo Laboratory 2 0.00
SRS876773 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 2 0.00
ERS2715879 ERP110263 Colon C57BL/6 Envigo Laboratory 1 0.00
SRS876777 SRP056326 Feces A/J Envigo Laboratory 2 0.00
SRS876800 SRP056326 Feces A/J Envigo Laboratory 2 0.00
SRS876785 SRP056326 Feces C57BL/6 Envigo Laboratory 2 0.00
SRS876805 SRP056326 Feces A/J The Jackson Laboratory Laboratory 2 0.00
ERS2715812 ERP110263 Colon C57BL/6 Envigo Laboratory 2 0.00
ERS2716842 ERP110263 Feces C57BL/6 Envigo Laboratory 2 0.00
SRS876772 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 2 0.00
SRS876796 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 2 0.00
SRS876849 SRP056326 Feces A/J The Jackson Laboratory Laboratory 2 0.00
SRS876797 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 2 0.00
ERS2716746 ERP110263 Stomach C57BL/6 Envigo Laboratory 1 0.00
SRS876794 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 2 0.00
SRS876818 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 2 0.00
SRS876938 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 2 0.00
ERS2716398 ERP110263 Jejunum C57BL/6 Envigo Laboratory 1 0.00
SRS2290077 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
ERS2716287 ERP110263 Ileum C57BL/6 Envigo Laboratory 1 0.00
SRS876791 SRP056326 Feces BALB/c Envigo Laboratory 1 0.00
SRS876790 SRP056326 Feces BALB/c Envigo Laboratory 1 0.00
SRS876789 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
SRS876776 SRP056326 Feces A/J The Jackson Laboratory Laboratory 1 0.00
SRS876837 SRP056326 Feces C57BL/6 Envigo Laboratory 1 0.00
SRS876844 SRP056326 Feces C57BL/6 Envigo Laboratory 1 0.00
SRS876842 SRP056326 Feces C57BL/6 Envigo Laboratory 1 0.00
SRS876829 SRP056326 Feces BALB/c Envigo Laboratory 1 0.00
SRS876832 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
ERS2716838 ERP110263 Feces C57BL/6 Envigo Laboratory 1 0.00
SRS876823 SRP056326 Feces BALB/c Envigo Laboratory 1 0.00
SRS876826 SRP056326 Feces BALB/c Envigo Laboratory 1 0.00
SRS876942 SRP056326 Feces A/J Envigo Laboratory 1 0.00
SRS876825 SRP056326 Feces BALB/c Envigo Laboratory 1 0.00
SRS876852 SRP056326 Feces A/J Envigo Laboratory 1 0.00
SRS876781 SRP056326 Feces A/J The Jackson Laboratory Laboratory 1 0.00
SRS876887 SRP056326 Feces BALB/c Envigo Laboratory 1 0.00
ERS2716175 ERP110263 Duodenum C57BL/6 Envigo Laboratory 1 0.00
SRS876770 SRP056326 Feces BALB/c Envigo Laboratory 1 0.00
SRS876783 SRP056326 Feces C57BL/6 Envigo Laboratory 1 0.00
ERS2716840 ERP110263 Feces C57BL/6 Envigo Laboratory 1 0.00
SRS876767 SRP056326 Feces BALB/c Envigo Laboratory 1 0.00
SRS876775 SRP056326 Feces A/J Envigo Laboratory 1 0.00
SRS876816 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 1 0.00
SRS876807 SRP056326 Feces C57BL/6 Envigo Laboratory 1 0.00
ERS2716079 ERP110263 Duodenum C57BL/6 Envigo Laboratory 1 0.00
SRS876803 SRP056326 Feces A/J The Jackson Laboratory Laboratory 1 0.00
SRS876857 SRP056326 Feces A/J Envigo Laboratory 1 0.00
SRS876850 SRP056326 Feces A/J The Jackson Laboratory Laboratory 1 0.00
SRS876861 SRP056326 Feces A/J Envigo Laboratory 1 0.00
SRS876892 SRP056326 Feces A/J Envigo Laboratory 1 0.00
ERS2716839 ERP110263 Feces C57BL/6 Envigo Laboratory 1 0.00
SRS876798 SRP056326 Feces A/J Envigo Laboratory 1 0.00
SRS876860 SRP056326 Feces A/J Envigo Laboratory 1 0.00
SRS876819 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 1 0.00
SRS876834 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
SRS876851 SRP056326 Feces A/J The Jackson Laboratory Laboratory 1 0.00
SRS876815 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 1 0.00
SRS876858 SRP056326 Feces A/J Envigo Laboratory 1 0.00
SRS876813 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
SRS876853 SRP056326 Feces A/J Envigo Laboratory 1 0.00
SRS876804 SRP056326 Feces A/J The Jackson Laboratory Laboratory 1 0.00
SRS876947 SRP056326 Feces A/J The Jackson Laboratory Laboratory 1 0.00
SRS876795 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 1 0.00
SRS876820 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 1 0.00