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Helicobacter (Genus)

Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter;

This taxon was found in 6.25% of laboratory mice duodenum, 12.67% of laboratory mice cecum, 5.32% of laboratory mice feces, 100.0% of wild mice ileocecum, 100.0% of wild mice cecum (with ≥1% threshold).

Relative abundance

Relative abundance in each sample

Sample accession Project accession Sampling location Genotype Vendor Origin Count Relative abundance (%)
SRS2290083 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 6637 50.73
SRS2290207 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 18781 44.61
SRS2290163 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 17253 43.70
SRS2290161 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 20937 42.59
SRS2290237 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 4481 42.37
SRS2290160 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 6024 42.32
SRS2290204 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 14544 41.74
SRS2290206 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 12442 40.93
SRS2290211 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 5881 40.81
SRS2290121 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 4241 40.41
SRS2290023 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 5489 40.19
SRS2290239 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 5096 39.63
SRS2290106 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 20709 39.30
SRS2290165 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3707 38.87
SRS2290074 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 4769 38.51
SRS2290240 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 10079 37.52
SRS2290102 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 14714 37.47
SRS2290099 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 4995 37.38
SRS2290212 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 5076 37.16
SRS2290096 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 5426 36.39
SRS2290241 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 10534 35.96
SRS2290243 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 12806 35.41
SRS2290164 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 4893 34.14
SRS2290048 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 4514 33.80
SRS2290167 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 4549 33.48
SRS2290079 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 16698 33.22
SRS2290217 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 5376 32.95
SRS2290238 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 6988 32.32
SRS2290244 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 9284 32.26
SRS2290213 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3477 31.87
SRS2290103 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3632 31.77
SRS2290175 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 17083 31.69
SRS2290077 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 15248 31.65
SRS2290101 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 4783 31.40
SRS2290200 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 9763 31.32
SRS2290124 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 12150 31.25
SRS2290032 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2837 30.78
SRS2290084 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3948 30.67
SRS2290233 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 9560 30.37
SRS2290215 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2670 29.31
SRS2290242 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3120 29.02
SRS2290081 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 12369 28.91
SRS2290078 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 10492 28.62
SRS2290057 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2920 28.46
SRS2290053 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2659 28.42
SRS2290073 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 10333 28.32
SRS2290016 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3666 28.32
SRS2290117 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 10700 27.60
SRS2290203 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 9065 27.35
SRS2290157 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 9622 27.31
SRS2290216 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3981 27.26
SRS2290014 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3795 27.16
SRS2290162 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 5342 27.04
SRS2290214 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3626 26.82
SRS2290039 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3831 26.13
SRS2290210 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2860 25.98
SRS2290052 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3899 25.46
SRS2290056 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2451 25.43
SRS2290061 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3291 25.42
SRS2290093 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3760 24.58
SRS2290100 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 9767 24.16
SRS2290209 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2571 24.03
SRS2290119 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2623 22.93
SRS2290158 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 10028 21.99
SRS2290075 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 9872 21.76
SRS2290105 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 4360 21.43
SRS2290055 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3133 21.01
SRS2290107 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2468 20.79
SRS2290208 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2314 20.55
SRS5679046 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 801 20.39
SRS2290198 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 4539 20.04
SRS2290076 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 6694 19.48
SRS2290085 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2339 19.43
SRS2290201 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 6057 17.33
SRS2290205 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 5823 16.70
SRS2290058 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2060 16.03
SRS2290159 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1933 15.52
SRS2290134 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1823 15.43
SRS2290140 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2797 15.15
SRS2290082 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1732 14.93
SRS2290148 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2091 14.84
SRS2290202 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3631 14.67
SRS2290234 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3073 14.64
SRS2290015 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1586 14.50
SRS5679035 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 846 14.37
SRS4889698 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 4091 13.61
SRS5679068 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 691 13.40
SRS2290018 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1872 12.99
SRS4889336 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 5739 12.88
SRS2290049 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1078 12.53
SRS4889696 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 6614 11.77
SRS2290031 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1608 11.64
SRS2290059 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 4024 11.44
SRS2290104 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1515 11.41
SRS4889617 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 5516 11.20
SRS2290136 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1212 10.51
SRS2290024 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1250 10.50
SRS4889343 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 3079 10.46
SRS2290021 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1109 10.04
SRS2290020 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1517 9.97
SRS2290017 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1288 9.50
SRS5679057 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 641 9.46
SRS4889366 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 4390 9.42
SRS5679078 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 367 9.41
SRS5679077 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 377 8.14
SRS5679079 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 378 7.84
SRS5679025 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 313 7.70
SRS5679033 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 167 7.09
SRS2290050 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1121 7.04
SRS4889619 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 3079 6.93
SRS2290086 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 629 6.60
SRS5679080 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 289 6.51
SRS2290051 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 696 5.82
SRS2290072 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 716 5.59
SRS5679023 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 209 5.35
SRS1872579 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 1075 4.95
SRS5679030 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 153 4.55
SRS5679032 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 131 4.07
SRS4889367 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 1565 3.98
SRS5679026 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 207 3.76
SRS5679028 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 122 3.40
SRS5679024 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 103 2.78
SRS5679034 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 131 2.73
SRS2290019 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 353 2.72
SRS1872570 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 483 2.59
SRS1872567 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 435 2.57
SRS1872566 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 458 2.44
SRS1872573 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 402 2.25
SRS1872568 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 401 2.18
SRS1872586 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 472 2.16
SRS1872565 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 427 2.05
SRS1872596 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 344 1.84
SRS1872584 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 377 1.84
SRS1872589 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 294 1.78
SRS1872576 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 353 1.78
SRS5679031 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 70 1.68
SRS1872597 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 288 1.63
SRS1872587 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 299 1.58
SRS1872600 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 260 1.57
SRS1872571 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 303 1.56
SRS1872580 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 323 1.48
SRS1872572 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 247 1.42
SRS5679029 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 72 1.42
SRS1872588 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 224 1.24
SRS1872569 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 207 1.24
ERS2716146 ERP110263 Duodenum C57BL/6 Envigo Laboratory 394 1.06
SRS4889824 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 18 0.50
ERS2716197 ERP110263 Duodenum C57BL/6 Envigo Laboratory 142 0.28
ERS2716097 ERP110263 Duodenum C57BL/6 Envigo Laboratory 64 0.19
ERS2716231 ERP110263 Ileum C57BL/6 Envigo Laboratory 21 0.12
ERS2716208 ERP110263 Duodenum C57BL/6 Envigo Laboratory 13 0.11
ERS2716278 ERP110263 Ileum C57BL/6 Envigo Laboratory 42 0.07
ERS2716443 ERP110263 Jejunum C57BL/6 Envigo Laboratory 4 0.05
SRS1099749 SRP064488 Feces C57BL/6 The Jackson Laboratory Laboratory 6 0.04
SRS4889319 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 8 0.04
ERS2716666 ERP110263 Stomach C57BL/6 Envigo Laboratory 4 0.04
SRS4889870 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 9 0.03
SRS4889697 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 9 0.03
SRS1099750 SRP064488 Feces C57BL/6 The Jackson Laboratory Laboratory 3 0.03
SRS4889326 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 9 0.03
SRS4889876 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 6 0.02
SRS4889699 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 7 0.02
SRS4889869 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 6 0.02
SRS4889877 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 6 0.02
SRS4889530 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory 6 0.02
SRS4889873 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 4 0.02
SRS4889693 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 5 0.02
SRS4889826 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 6 0.01
SRS4889325 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 6 0.01
SRS4889707 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 4 0.01
SRS4889273 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory 4 0.01
SRS4889206 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory 4 0.01
SRS4889872 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 5 0.01
SRS4889875 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 4 0.01
ERS2716409 ERP110263 Jejunum C57BL/6 Envigo Laboratory 4 0.01
SRS4889553 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory 6 0.01
SRS3667866 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 4 0.01
SRS4889694 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 5 0.01
SRS4889871 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 4 0.01
SRS4889868 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 3 0.01
SRS4889810 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory 3 0.01
SRS4889551 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory 4 0.01
SRS4889324 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 3 0.01
ERS2716479 ERP110263 Jejunum C57BL/6 Envigo Laboratory 2 0.01
SRS4889695 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 3 0.01
SRS4889769 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 2 0.01
SRS4889220 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory 3 0.01
ERS2716143 ERP110263 Duodenum C57BL/6 Envigo Laboratory 4 0.01
SRS4889701 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 2 0.01
SRS3667863 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 2 0.01
SRS4889813 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory 2 0.01
SRS3667882 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 2 0.01
SRS3667867 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 2 0.00
SRS3667902 SRP157514 Cecum C57BL/6 Charles River Laboratories Laboratory 2 0.00
ERS2716028 ERP110263 Cecum C57BL/6 Envigo Laboratory 2 0.00
SRS4889327 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 2 0.00
SRS4889874 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 2 0.00