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PAC001097_s (Species)

Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; PAC001097_g; PAC001097_s;

This taxon was found in 2.94% of laboratory mice jejunum, 0.67% of laboratory mice cecum, 1.33% of laboratory mice feces, 2.04% of wild mice ileocecum (with ≥1% threshold).

Relative abundance

Relative abundance in each sample

Sample accession Project accession Sampling location Genotype Vendor Origin Count Relative abundance (%)
SRS2290159 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 663 5.56
SRS1945774 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 2369 4.29
SRS2063199 SRP102269 Feces C57BL/6 National Laboratory Animal Center Laboratory 2436 3.92
SRS1945734 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 2022 3.78
SRS2290101 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 466 3.07
SRS5679023 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 110 2.83
SRS1945735 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 1055 2.04
ERS2716365 ERP110263 Jejunum C57BL/6 Envigo Laboratory 716 1.19
SRS1945733 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 588 1.05
SRS2290148 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 135 0.97
ERS2716175 ERP110263 Duodenum C57BL/6 Envigo Laboratory 480 0.76
SRS1872584 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 154 0.75
ERS2715913 ERP110263 Cecum C57BL/6 Envigo Laboratory 419 0.68
SRS5679046 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 26 0.66
ERS2715846 ERP110263 Colon C57BL/6 Envigo Laboratory 291 0.59
SRS1945732 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 292 0.53
SRS5679057 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 35 0.52
SRS1872570 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 82 0.44
SRS5679068 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 22 0.43
ERS2715779 ERP110263 Colon C57BL/6 Envigo Laboratory 270 0.37
ERS2715980 ERP110263 Cecum C57BL/6 Envigo Laboratory 147 0.30
ERS2716164 ERP110263 Duodenum C57BL/6 Envigo Laboratory 39 0.29
ERS2716208 ERP110263 Duodenum C57BL/6 Envigo Laboratory 27 0.22
ERS2716839 ERP110263 Feces C57BL/6 Envigo Laboratory 153 0.22
ERS2716566 ERP110263 Jejunum C57BL/6 Envigo Laboratory 50 0.21
ERS2716700 ERP110263 Stomach C57BL/6 Envigo Laboratory 95 0.16
ERS2716633 ERP110263 Stomach C57BL/6 Envigo Laboratory 91 0.15
SRS2063203 SRP102269 Feces C57BL/6 National Laboratory Animal Center Laboratory 88 0.14
ERS2716845 ERP110263 Feces C57BL/6 Envigo Laboratory 69 0.14
ERS2716097 ERP110263 Duodenum C57BL/6 Envigo Laboratory 41 0.12
SRS1945773 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 48 0.10
ERS2716510 ERP110263 Jejunum C57BL/6 Envigo Laboratory 62 0.10
SRS1945771 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 45 0.09
SRS1945772 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 44 0.08
SRS1945730 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 42 0.08
ERS2716610 ERP110263 Jejunum C57BL/6 Envigo Laboratory 29 0.07
ERS2716844 ERP110263 Feces C57BL/6 Envigo Laboratory 39 0.06
ERS2716680 ERP110263 Stomach C57BL/6 Envigo Laboratory 36 0.06
ERS2715894 ERP110263 Colon C57BL/6 Envigo Laboratory 7 0.06
ERS2716548 ERP110263 Jejunum C57BL/6 Envigo Laboratory 32 0.05
ERS2715801 ERP110263 Colon C57BL/6 Envigo Laboratory 30 0.05
ERS2716613 ERP110263 Jejunum C57BL/6 Envigo Laboratory 29 0.05
SRS2290020 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 8 0.05
ERS2715946 ERP110263 Cecum C57BL/6 Envigo Laboratory 34 0.05
ERS2715962 ERP110263 Cecum C57BL/6 Envigo Laboratory 13 0.05
ERS2715868 ERP110263 Colon C57BL/6 Envigo Laboratory 22 0.05
ERS2715895 ERP110263 Cecum C57BL/6 Envigo Laboratory 22 0.05
ERS2716655 ERP110263 Stomach C57BL/6 Envigo Laboratory 24 0.04
ERS2715935 ERP110263 Cecum C57BL/6 Envigo Laboratory 27 0.04
ERS2716013 ERP110263 Cecum C57BL/6 Envigo Laboratory 14 0.04
ERS2716722 ERP110263 Stomach C57BL/6 Envigo Laboratory 17 0.04
ERS2716002 ERP110263 Cecum C57BL/6 Envigo Laboratory 9 0.04
ERS2715879 ERP110263 Colon C57BL/6 Envigo Laboratory 13 0.04
SRS2063201 SRP102269 Feces C57BL/6 National Laboratory Animal Center Laboratory 24 0.03
ERS2716146 ERP110263 Duodenum C57BL/6 Envigo Laboratory 11 0.03
ERS2716615 ERP110263 Stomach C57BL/6 Envigo Laboratory 18 0.03
ERS2716588 ERP110263 Jejunum C57BL/6 Envigo Laboratory 7 0.03
SRS2063205 SRP102269 Feces C57BL/6 National Laboratory Animal Center Laboratory 19 0.03
ERS2716186 ERP110263 Duodenum C57BL/6 Envigo Laboratory 5 0.03
ERS2716744 ERP110263 Stomach C57BL/6 Envigo Laboratory 15 0.03
ERS2715961 ERP110263 Cecum C57BL/6 Envigo Laboratory 21 0.03
SRS2290208 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3 0.03
SRS1872566 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 5 0.03
ERS2715761 ERP110263 Colon C57BL/6 Envigo Laboratory 17 0.03
ERS2716443 ERP110263 Jejunum C57BL/6 Envigo Laboratory 2 0.03
ERS2715957 ERP110263 Cecum C57BL/6 Envigo Laboratory 17 0.03
ERS2716746 ERP110263 Stomach C57BL/6 Envigo Laboratory 9 0.02
SRS5679077 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 1 0.02
ERS2715959 ERP110263 Cecum C57BL/6 Envigo Laboratory 15 0.02
ERS2715827 ERP110263 Colon C57BL/6 Envigo Laboratory 16 0.02
SRS5679034 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 1 0.02
ERS2716677 ERP110263 Stomach C57BL/6 Envigo Laboratory 7 0.02
ERS2716144 ERP110263 Duodenum C57BL/6 Envigo Laboratory 13 0.02
ERS2716499 ERP110263 Jejunum C57BL/6 Envigo Laboratory 13 0.02
ERS2716079 ERP110263 Duodenum C57BL/6 Envigo Laboratory 12 0.02
ERS2715892 ERP110263 Colon C57BL/6 Envigo Laboratory 9 0.02
ERS2716298 ERP110263 Ileum C57BL/6 Envigo Laboratory 2 0.02
ERS2716130 ERP110263 Duodenum C57BL/6 Envigo Laboratory 5 0.02
ERS2716231 ERP110263 Ileum C57BL/6 Envigo Laboratory 3 0.02
SRS5679035 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 1 0.02
ERS2716841 ERP110263 Feces C57BL/6 Envigo Laboratory 12 0.02
ERS2716277 ERP110263 Ileum C57BL/6 Envigo Laboratory 2 0.02
SRS2063210 SRP102269 Feces C57BL/6 National Laboratory Animal Center Laboratory 9 0.02
ERS2716028 ERP110263 Cecum C57BL/6 Envigo Laboratory 9 0.02
ERS2715825 ERP110263 Colon C57BL/6 Envigo Laboratory 12 0.02
ERS2715960 ERP110263 Cecum C57BL/6 Envigo Laboratory 8 0.01
SRS1872565 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 3 0.01
ERS2715890 ERP110263 Colon C57BL/6 Envigo Laboratory 8 0.01
ERS2716119 ERP110263 Duodenum C57BL/6 Envigo Laboratory 9 0.01
ERS2716024 ERP110263 Cecum C57BL/6 Envigo Laboratory 6 0.01
SRS2290217 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
SRS1945775 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 6 0.01
ERS2716747 ERP110263 Stomach C57BL/6 Envigo Laboratory 4 0.01
ERS2716681 ERP110263 Stomach C57BL/6 Envigo Laboratory 6 0.01
ERS2716026 ERP110263 Cecum C57BL/6 Envigo Laboratory 5 0.01
ERS2716612 ERP110263 Jejunum C57BL/6 Envigo Laboratory 7 0.01
SRS2290053 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.01
ERS2716143 ERP110263 Duodenum C57BL/6 Envigo Laboratory 7 0.01
ERS2716679 ERP110263 Stomach C57BL/6 Envigo Laboratory 7 0.01
ERS2715828 ERP110263 Colon C57BL/6 Envigo Laboratory 2 0.01
ERS2715823 ERP110263 Colon C57BL/6 Envigo Laboratory 6 0.01
SRS1872586 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 2 0.01
ERS2716644 ERP110263 Stomach C57BL/6 Envigo Laboratory 6 0.01
SRS2290198 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
ERS2716545 ERP110263 Jejunum C57BL/6 Envigo Laboratory 6 0.01
SRS2290134 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.01
ERS2716320 ERP110263 Ileum C57BL/6 Envigo Laboratory 2 0.01
SRS2290239 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.01
SRS2290048 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.01
ERS2716733 ERP110263 Stomach C57BL/6 Envigo Laboratory 2 0.01
ERS2715902 ERP110263 Cecum C57BL/6 Envigo Laboratory 4 0.01
SRS2290164 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.01
SRS1945729 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 4 0.01
SRS2290216 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.01
SRS2063208 SRP102269 Feces C57BL/6 National Laboratory Animal Center Laboratory 4 0.01
ERS2716242 ERP110263 Ileum C57BL/6 Envigo Laboratory 4 0.01
ERS2716432 ERP110263 Jejunum C57BL/6 Envigo Laboratory 1 0.01
ERS2716577 ERP110263 Jejunum C57BL/6 Envigo Laboratory 3 0.01
SRS876952 SRP056326 Feces C57BL/6 Envigo Laboratory 4 0.01
ERS2716141 ERP110263 Duodenum C57BL/6 Envigo Laboratory 4 0.01
ERS2715826 ERP110263 Colon C57BL/6 Envigo Laboratory 3 0.01
ERS2715835 ERP110263 Colon C57BL/6 Envigo Laboratory 3 0.01
SRS876809 SRP056326 Feces C57BL/6 Envigo Laboratory 4 0.01
SRS1872589 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 1 0.01
ERS2715768 ERP110263 Colon C57BL/6 Envigo Laboratory 4 0.01
ERS2716027 ERP110263 Cecum C57BL/6 Envigo Laboratory 3 0.01
SRS1945726 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 4 0.01
SRS1872567 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 1 0.01
ERS2715893 ERP110263 Colon C57BL/6 Envigo Laboratory 4 0.01
SRS1872573 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 1 0.01
ERS2715812 ERP110263 Colon C57BL/6 Envigo Laboratory 4 0.01
SRS1945728 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 3 0.01
SRS1872596 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 1 0.01
SRS1945727 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 3 0.01
ERS2716682 ERP110263 Stomach C57BL/6 Envigo Laboratory 3 0.01
ERS2715969 ERP110263 Cecum C57BL/6 Envigo Laboratory 3 0.01
ERS2716376 ERP110263 Jejunum C57BL/6 Envigo Laboratory 3 0.01
ERS2716387 ERP110263 Jejunum C57BL/6 Envigo Laboratory 3 0.01
SRS1872576 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 1 0.01
ERS2716086 ERP110263 Duodenum C57BL/6 Envigo Laboratory 3 0.01
ERS2716521 ERP110263 Jejunum C57BL/6 Envigo Laboratory 3 0.01
ERS2716481 ERP110263 Jejunum C57BL/6 Envigo Laboratory 3 0.00
SRS2290207 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.00
ERS2716846 ERP110263 Feces C57BL/6 Envigo Laboratory 3 0.00
ERS2716622 ERP110263 Stomach C57BL/6 Envigo Laboratory 3 0.00
SRS1872579 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 1 0.00
SRS2063211 SRP102269 Feces C57BL/6 National Laboratory Animal Center Laboratory 1 0.00
ERS2716842 ERP110263 Feces C57BL/6 Envigo Laboratory 3 0.00
ERS2716398 ERP110263 Jejunum C57BL/6 Envigo Laboratory 2 0.00
ERS2716197 ERP110263 Duodenum C57BL/6 Envigo Laboratory 2 0.00
ERS2716253 ERP110263 Ileum C57BL/6 Envigo Laboratory 1 0.00
SRS876901 SRP056326 Feces C57BL/6 Envigo Laboratory 2 0.00
SRS1945768 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 2 0.00
ERS2715790 ERP110263 Colon C57BL/6 Envigo Laboratory 2 0.00
ERS2716689 ERP110263 Stomach C57BL/6 Envigo Laboratory 2 0.00
SRS1945770 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 2 0.00
SRS1945766 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 2 0.00
ERS2716421 ERP110263 Jejunum C57BL/6 Envigo Laboratory 1 0.00
ERS2716331 ERP110263 Ileum C57BL/6 Envigo Laboratory 1 0.00
ERS2716264 ERP110263 Ileum C57BL/6 Envigo Laboratory 2 0.00
ERS2715991 ERP110263 Cecum C57BL/6 Envigo Laboratory 1 0.00
SRS1945731 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 2 0.00
ERS2716614 ERP110263 Jejunum C57BL/6 Envigo Laboratory 2 0.00
ERS2716488 ERP110263 Jejunum C57BL/6 Envigo Laboratory 2 0.00
ERS2716476 ERP110263 Jejunum C57BL/6 Envigo Laboratory 1 0.00
SRS876950 SRP056326 Feces C57BL/6 Envigo Laboratory 2 0.00
ERS2716108 ERP110263 Duodenum C57BL/6 Envigo Laboratory 2 0.00
ERS2716843 ERP110263 Feces C57BL/6 Envigo Laboratory 2 0.00
SRS2290203 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
ERS2715924 ERP110263 Cecum C57BL/6 Envigo Laboratory 2 0.00
SRS2290059 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
ERS2716145 ERP110263 Duodenum C57BL/6 Envigo Laboratory 1 0.00
SRS2290124 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
SRS4889871 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 1 0.00
ERS2716309 ERP110263 Ileum C57BL/6 Envigo Laboratory 1 0.00
SRS2290081 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
SRS4889619 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 1 0.00
SRS2290077 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
SRS2290161 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
SRS1945767 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
ERS2716220 ERP110263 Ileum C57BL/6 Envigo Laboratory 1 0.00
ERS2716354 ERP110263 Jejunum C57BL/6 Envigo Laboratory 1 0.00
ERS2716838 ERP110263 Feces C57BL/6 Envigo Laboratory 1 0.00
SRS876806 SRP056326 Feces C57BL/6 Envigo Laboratory 1 0.00
ERS2716412 ERP110263 Jejunum C57BL/6 Envigo Laboratory 1 0.00
SRS876799 SRP056326 Feces A/J Envigo Laboratory 1 0.00