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Pseudomonas (Genus)

Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas;

Relative abundance

Relative abundance in each sample

Sample accession Project accession Sampling location Genotype Vendor Origin Count Relative abundance (%)
ERS2716280 ERP110263 Ileum C57BL/6 Envigo Laboratory 312 0.97
ERS2716613 ERP110263 Jejunum C57BL/6 Envigo Laboratory 410 0.75
ERS2716548 ERP110263 Jejunum C57BL/6 Envigo Laboratory 174 0.29
SRS5679046 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 10 0.25
ERS2716479 ERP110263 Jejunum C57BL/6 Envigo Laboratory 44 0.17
ERS2716747 ERP110263 Stomach C57BL/6 Envigo Laboratory 53 0.15
SRS5679035 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 6 0.10
SRS2719326 SRP125798 Feces C57BL/6 Charles River Laboratories Laboratory 14 0.10
SRS347385 SRP012588 Cecum WSB/EiJ The Jackson Laboratory Laboratory 6 0.08
SRS5679025 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 3 0.07
SRS347319 SRP012588 Cecum CAST/EiJ The Jackson Laboratory Laboratory 19 0.07
SRS5679030 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 2 0.06
SRS2290016 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 7 0.05
SRS5679023 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 2 0.05
ERS2716345 ERP110263 Ileum C57BL/6 Envigo Laboratory 15 0.05
ERS2716666 ERP110263 Stomach C57BL/6 Envigo Laboratory 5 0.05
ERS2716146 ERP110263 Duodenum C57BL/6 Envigo Laboratory 18 0.05
SRS5679031 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 2 0.05
ERS2716231 ERP110263 Ileum C57BL/6 Envigo Laboratory 8 0.05
SRS347342 SRP012588 Cecum NOD/LtJ The Jackson Laboratory Laboratory 5 0.05
SRS5679079 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 2 0.04
ERS2716610 ERP110263 Jejunum C57BL/6 Envigo Laboratory 18 0.04
ERS2715893 ERP110263 Colon C57BL/6 Envigo Laboratory 23 0.03
ERS2715828 ERP110263 Colon C57BL/6 Envigo Laboratory 6 0.03
SRS3665198 SRP157514 Cecum C57BL/6 Charles River Laboratories Laboratory 3 0.03
SRS5679077 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 1 0.02
SRS347344 SRP012588 Cecum NZO/HILtJ The Jackson Laboratory Laboratory 2 0.02
SRS347318 SRP012588 Cecum CAST/EiJ The Jackson Laboratory Laboratory 2 0.02
SRS5679029 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 1 0.02
SRS2529819 SRP145069 Colon C57BL/6 Janvier Labs Laboratory 4 0.02
ERS2716681 ERP110263 Stomach C57BL/6 Envigo Laboratory 10 0.02
ERS2716130 ERP110263 Duodenum C57BL/6 Envigo Laboratory 5 0.02
SRS3665216 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 5 0.02
SRS347286 SRP012588 Cecum 129S1/SvImJ The Jackson Laboratory Laboratory 2 0.02
ERS2715894 ERP110263 Colon C57BL/6 Envigo Laboratory 2 0.02
SRS2290083 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.02
SRS2290214 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
SRS347304 SRP012588 Cecum C57BL/6 The Jackson Laboratory Laboratory 2 0.01
ERS2715892 ERP110263 Colon C57BL/6 Envigo Laboratory 7 0.01
ERS2716175 ERP110263 Duodenum C57BL/6 Envigo Laboratory 9 0.01
SRS3667862 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 4 0.01
SRS3665215 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 10 0.01
SRS3665208 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 3 0.01
ERS2716097 ERP110263 Duodenum C57BL/6 Envigo Laboratory 4 0.01
SRS1945770 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 6 0.01
SRS3665206 SRP157514 Cecum C57BL/6 Charles River Laboratories Laboratory 2 0.01
SRS3665233 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 5 0.01
SRS347336 SRP012588 Cecum NOD/LtJ The Jackson Laboratory Laboratory 1 0.01
SRS2290233 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3 0.01
SRS2290234 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
ERS2716480 ERP110263 Jejunum C57BL/6 Envigo Laboratory 2 0.01
SRS347311 SRP012588 Cecum C3H/Ri The Jackson Laboratory Laboratory 1 0.01
SRS2290106 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 5 0.01
ERS2716119 ERP110263 Duodenum C57BL/6 Envigo Laboratory 6 0.01
SRS3665197 SRP157514 Cecum C57BL/6 Charles River Laboratories Laboratory 5 0.01
SRS347287 SRP012588 Cecum 129S1/SvImJ The Jackson Laboratory Laboratory 1 0.01
SRS2290198 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
SRS2290076 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3 0.01
SRS2290204 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3 0.01
ERS2716614 ERP110263 Jejunum C57BL/6 Envigo Laboratory 5 0.01
SRS876930 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.01
SRS2290243 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3 0.01
SRS3665229 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 4 0.01
SRS347362 SRP012588 Cecum PWK/PhJ The Jackson Laboratory Laboratory 1 0.01
SRS347321 SRP012588 Cecum CAST/EiJ The Jackson Laboratory Laboratory 1 0.01
SRS2290079 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 4 0.01
SRS3665226 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 3 0.01
SRS3665228 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 3 0.01
SRS347386 SRP012588 Cecum WSB/EiJ The Jackson Laboratory Laboratory 1 0.01
SRS2290102 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3 0.01
SRS2290163 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3 0.01
ERS2716144 ERP110263 Duodenum C57BL/6 Envigo Laboratory 5 0.01
SRS3665199 SRP157514 Cecum C57BL/6 Charles River Laboratories Laboratory 4 0.01
SRS2290240 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
SRS2290100 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3 0.01
SRS2290148 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.01
SRS2290244 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
SRS3665239 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 2 0.01
SRS2290241 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
ERS2716346 ERP110263 Ileum C57BL/6 Envigo Laboratory 3 0.01
SRS2290158 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3 0.01
SRS2290206 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
SRS2290200 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
SRS3665200 SRP157514 Cecum C57BL/6 Charles River Laboratories Laboratory 2 0.01
SRS2290050 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.01
ERS2716680 ERP110263 Stomach C57BL/6 Envigo Laboratory 4 0.01
ERS2716079 ERP110263 Duodenum C57BL/6 Envigo Laboratory 4 0.01
ERS2716612 ERP110263 Jejunum C57BL/6 Envigo Laboratory 4 0.01
SRS347323 SRP012588 Cecum CAST/EiJ The Jackson Laboratory Laboratory 1 0.01
SRS2290205 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
SRS2290201 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
SRS2290059 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
SRS2290157 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
SRS2290073 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
SRS2290078 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
ERS2716478 ERP110263 Jejunum C57BL/6 Envigo Laboratory 1 0.01
SRS1872566 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 1 0.01
ERS2716145 ERP110263 Duodenum C57BL/6 Envigo Laboratory 2 0.01
SRS2290117 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
ERS2716278 ERP110263 Ileum C57BL/6 Envigo Laboratory 3 0.01
SRS347334 SRP012588 Cecum NOD/LtJ The Jackson Laboratory Laboratory 1 0.01
SRS2290207 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.00
SRS2290081 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.00
ERS2716499 ERP110263 Jejunum C57BL/6 Envigo Laboratory 3 0.00
SRS2290077 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.00
SRS2290161 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.00
SRS2290202 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
ERS2716320 ERP110263 Ileum C57BL/6 Envigo Laboratory 1 0.00
ERS2716555 ERP110263 Jejunum C57BL/6 Envigo Laboratory 2 0.00
ERS2716331 ERP110263 Ileum C57BL/6 Envigo Laboratory 1 0.00
SRS3667880 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 1 0.00
SRS3665241 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 3 0.00
SRS3665227 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 1 0.00
SRS3665219 SRP157514 Cecum C57BL/6 Charles River Laboratories Laboratory 2 0.00
ERS2716682 ERP110263 Stomach C57BL/6 Envigo Laboratory 2 0.00
SRS3665243 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 2 0.00
SRS2290203 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
SRS876916 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 2 0.00
SRS2290124 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
SRS4889826 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 1 0.00
ERS2716746 ERP110263 Stomach C57BL/6 Envigo Laboratory 1 0.00
SRS4889619 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 1 0.00
ERS2716577 ERP110263 Jejunum C57BL/6 Envigo Laboratory 1 0.00
SRS3667893 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 1 0.00
SRS3665201 SRP157514 Cecum C57BL/6 Charles River Laboratories Laboratory 1 0.00
SRS1945728 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
SRS2290175 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
SRS876882 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
SRS1945730 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
ERS2716655 ERP110263 Stomach C57BL/6 Envigo Laboratory 1 0.00
ERS2715890 ERP110263 Colon C57BL/6 Envigo Laboratory 1 0.00
SRS876787 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
ERS2716028 ERP110263 Cecum C57BL/6 Envigo Laboratory 1 0.00
ERS2716488 ERP110263 Jejunum C57BL/6 Envigo Laboratory 1 0.00
ERS2716481 ERP110263 Jejunum C57BL/6 Envigo Laboratory 1 0.00
ERS2716622 ERP110263 Stomach C57BL/6 Envigo Laboratory 1 0.00
SRS876873 SRP056326 Feces A/J The Jackson Laboratory Laboratory 1 0.00
SRS3665242 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 1 0.00
SRS876935 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 1 0.00