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PAC001228_s (Species)

Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; PAC001228_g; PAC001228_s;

This taxon was found in 1.33% of laboratory mice cecum, 0.27% of laboratory mice feces, 1.02% of wild mice ileocecum (with ≥1% threshold).

Relative abundance

Relative abundance in each sample

Sample accession Project accession Sampling location Genotype Vendor Origin Count Relative abundance (%)
SRS5679026 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 94 1.84
SRS2290244 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 491 1.74
SRS5679024 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 50 1.35
SRS876856 SRP056326 Feces BALB/c Envigo Laboratory 777 1.22
SRS5679031 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 38 0.94
SRS941143 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 211 0.89
SRS5679034 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 39 0.82
SRS5679030 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 25 0.76
ERS2715946 ERP110263 Cecum C57BL/6 Envigo Laboratory 489 0.75
SRS5679028 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 24 0.67
ERS1069635 ERP014408 Feces C57BL/6 Envigo Laboratory 335 0.65
SRS5679078 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 23 0.59
SRS940859 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 164 0.56
SRS876822 SRP056326 Feces BALB/c Envigo Laboratory 321 0.55
SRS2290163 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 176 0.45
SRS5679068 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 20 0.39
SRS5679029 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 19 0.38
SRS5679023 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 14 0.36
ERS2715879 ERP110263 Colon C57BL/6 Envigo Laboratory 97 0.29
SRS5679077 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 13 0.28
ERS2716144 ERP110263 Duodenum C57BL/6 Envigo Laboratory 181 0.28
SRS5679035 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 14 0.24
SRS940649 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 52 0.24
ERS2716013 ERP110263 Cecum C57BL/6 Envigo Laboratory 78 0.23
SRS941670 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 60 0.23
SRS5679033 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 5 0.22
ERS2715913 ERP110263 Cecum C57BL/6 Envigo Laboratory 117 0.19
ERS2715961 ERP110263 Cecum C57BL/6 Envigo Laboratory 137 0.18
ERS2716842 ERP110263 Feces C57BL/6 Envigo Laboratory 129 0.18
SRS5679032 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 5 0.16
SRS941212 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 39 0.14
ERS2715868 ERP110263 Colon C57BL/6 Envigo Laboratory 59 0.13
ERS2716613 ERP110263 Jejunum C57BL/6 Envigo Laboratory 69 0.13
ERS2715801 ERP110263 Colon C57BL/6 Envigo Laboratory 71 0.13
SRS5679079 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 6 0.12
ERS2715812 ERP110263 Colon C57BL/6 Envigo Laboratory 86 0.12
SRS940871 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 14 0.11
ERS2716002 ERP110263 Cecum C57BL/6 Envigo Laboratory 23 0.10
SRS5679057 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 6 0.09
SRS1945726 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 58 0.09
ERS2715935 ERP110263 Cecum C57BL/6 Envigo Laboratory 47 0.08
ERS2716164 ERP110263 Duodenum C57BL/6 Envigo Laboratory 10 0.07
SRS940678 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 21 0.07
ERS2716666 ERP110263 Stomach C57BL/6 Envigo Laboratory 7 0.07
ERS2716722 ERP110263 Stomach C57BL/6 Envigo Laboratory 29 0.07
SRS2290159 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 8 0.07
ERS2716146 ERP110263 Duodenum C57BL/6 Envigo Laboratory 22 0.06
ERS2716610 ERP110263 Jejunum C57BL/6 Envigo Laboratory 27 0.06
ERS2715857 ERP110263 Colon C57BL/6 Envigo Laboratory 11 0.05
ERS2715924 ERP110263 Cecum C57BL/6 Envigo Laboratory 36 0.05
ERS2716566 ERP110263 Jejunum C57BL/6 Envigo Laboratory 12 0.05
ERS2715894 ERP110263 Colon C57BL/6 Envigo Laboratory 6 0.05
ERS2716231 ERP110263 Ileum C57BL/6 Envigo Laboratory 8 0.05
ERS2716197 ERP110263 Duodenum C57BL/6 Envigo Laboratory 19 0.04
ERS2716655 ERP110263 Stomach C57BL/6 Envigo Laboratory 21 0.04
ERS2715779 ERP110263 Colon C57BL/6 Envigo Laboratory 26 0.04
ERS2715846 ERP110263 Colon C57BL/6 Envigo Laboratory 17 0.03
ERS2716208 ERP110263 Duodenum C57BL/6 Envigo Laboratory 4 0.03
ERS2715790 ERP110263 Colon C57BL/6 Envigo Laboratory 16 0.03
ERS2716612 ERP110263 Jejunum C57BL/6 Envigo Laboratory 20 0.03
ERS2716130 ERP110263 Duodenum C57BL/6 Envigo Laboratory 8 0.03
ERS2716633 ERP110263 Stomach C57BL/6 Envigo Laboratory 17 0.03
ERS2716145 ERP110263 Duodenum C57BL/6 Envigo Laboratory 10 0.03
ERS2715827 ERP110263 Colon C57BL/6 Envigo Laboratory 19 0.03
SRS876768 SRP056326 Feces BALB/c Envigo Laboratory 14 0.02
ERS2716838 ERP110263 Feces C57BL/6 Envigo Laboratory 14 0.02
ERS2716186 ERP110263 Duodenum C57BL/6 Envigo Laboratory 4 0.02
ERS2715980 ERP110263 Cecum C57BL/6 Envigo Laboratory 11 0.02
ERS2716028 ERP110263 Cecum C57BL/6 Envigo Laboratory 12 0.02
ERS2715828 ERP110263 Colon C57BL/6 Envigo Laboratory 4 0.02
ERS2716365 ERP110263 Jejunum C57BL/6 Envigo Laboratory 12 0.02
ERS2715902 ERP110263 Cecum C57BL/6 Envigo Laboratory 11 0.02
ERS2716398 ERP110263 Jejunum C57BL/6 Envigo Laboratory 8 0.02
ERS2715768 ERP110263 Colon C57BL/6 Envigo Laboratory 11 0.02
ERS2716143 ERP110263 Duodenum C57BL/6 Envigo Laboratory 11 0.02
ERS2716097 ERP110263 Duodenum C57BL/6 Envigo Laboratory 5 0.02
ERS2716733 ERP110263 Stomach C57BL/6 Envigo Laboratory 4 0.02
ERS2716141 ERP110263 Duodenum C57BL/6 Envigo Laboratory 9 0.01
ERS2716839 ERP110263 Feces C57BL/6 Envigo Laboratory 10 0.01
ERS2716644 ERP110263 Stomach C57BL/6 Envigo Laboratory 9 0.01
ERS2716846 ERP110263 Feces C57BL/6 Envigo Laboratory 8 0.01
ERS2715835 ERP110263 Colon C57BL/6 Envigo Laboratory 6 0.01
ERS2716841 ERP110263 Feces C57BL/6 Envigo Laboratory 7 0.01
SRS2290200 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3 0.01
SRS2290234 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
ERS2716108 ERP110263 Duodenum C57BL/6 Envigo Laboratory 6 0.01
ERS2716119 ERP110263 Duodenum C57BL/6 Envigo Laboratory 6 0.01
ERS2716622 ERP110263 Stomach C57BL/6 Envigo Laboratory 6 0.01
ERS2716577 ERP110263 Jejunum C57BL/6 Envigo Laboratory 4 0.01
ERS2716264 ERP110263 Ileum C57BL/6 Envigo Laboratory 4 0.01
ERS2716614 ERP110263 Jejunum C57BL/6 Envigo Laboratory 4 0.01
ERS2716175 ERP110263 Duodenum C57BL/6 Envigo Laboratory 4 0.01
ERS2716510 ERP110263 Jejunum C57BL/6 Envigo Laboratory 4 0.01
ERS2716681 ERP110263 Stomach C57BL/6 Envigo Laboratory 3 0.01
ERS2716840 ERP110263 Feces C57BL/6 Envigo Laboratory 3 0.00
ERS2716588 ERP110263 Jejunum C57BL/6 Envigo Laboratory 1 0.00
ERS2716320 ERP110263 Ileum C57BL/6 Envigo Laboratory 1 0.00
ERS2716689 ERP110263 Stomach C57BL/6 Envigo Laboratory 2 0.00
ERS2716421 ERP110263 Jejunum C57BL/6 Envigo Laboratory 1 0.00
ERS2715962 ERP110263 Cecum C57BL/6 Envigo Laboratory 1 0.00
ERS2715991 ERP110263 Cecum C57BL/6 Envigo Laboratory 1 0.00
ERS2715969 ERP110263 Cecum C57BL/6 Envigo Laboratory 2 0.00
ERS2716700 ERP110263 Stomach C57BL/6 Envigo Laboratory 2 0.00
ERS2716376 ERP110263 Jejunum C57BL/6 Envigo Laboratory 2 0.00
ERS2716086 ERP110263 Duodenum C57BL/6 Envigo Laboratory 2 0.00
ERS2716488 ERP110263 Jejunum C57BL/6 Envigo Laboratory 2 0.00
ERS2716532 ERP110263 Jejunum C57BL/6 Envigo Laboratory 2 0.00
ERS2716079 ERP110263 Duodenum C57BL/6 Envigo Laboratory 2 0.00
SRS2290204 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
ERS2715959 ERP110263 Cecum C57BL/6 Envigo Laboratory 2 0.00
ERS2716747 ERP110263 Stomach C57BL/6 Envigo Laboratory 1 0.00
ERS2716026 ERP110263 Cecum C57BL/6 Envigo Laboratory 1 0.00
ERS2716711 ERP110263 Stomach C57BL/6 Envigo Laboratory 1 0.00
ERS2716024 ERP110263 Cecum C57BL/6 Envigo Laboratory 1 0.00
SRS876921 SRP056326 Feces A/J Envigo Laboratory 1 0.00
ERS2716555 ERP110263 Jejunum C57BL/6 Envigo Laboratory 1 0.00
ERS2715895 ERP110263 Cecum C57BL/6 Envigo Laboratory 1 0.00
ERS2715892 ERP110263 Colon C57BL/6 Envigo Laboratory 1 0.00
ERS2716027 ERP110263 Cecum C57BL/6 Envigo Laboratory 1 0.00
SRS876847 SRP056326 Feces A/J The Jackson Laboratory Laboratory 1 0.00
ERS2716287 ERP110263 Ileum C57BL/6 Envigo Laboratory 1 0.00
SRS1945772 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
SRS876838 SRP056326 Feces C57BL/6 Envigo Laboratory 1 0.00
SRS2290175 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
SRS876845 SRP056326 Feces A/J The Jackson Laboratory Laboratory 1 0.00
ERS2715960 ERP110263 Cecum C57BL/6 Envigo Laboratory 1 0.00
SRS876827 SRP056326 Feces BALB/c Envigo Laboratory 1 0.00
SRS876839 SRP056326 Feces C57BL/6 Envigo Laboratory 1 0.00
ERS2715890 ERP110263 Colon C57BL/6 Envigo Laboratory 1 0.00
SRS1945733 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
SRS876844 SRP056326 Feces C57BL/6 Envigo Laboratory 1 0.00
SRS1945729 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
SRS1945769 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
ERS2716387 ERP110263 Jejunum C57BL/6 Envigo Laboratory 1 0.00
ERS2716344 ERP110263 Ileum C57BL/6 Envigo Laboratory 1 0.00
SRS876821 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 1 0.00
SRS876842 SRP056326 Feces C57BL/6 Envigo Laboratory 1 0.00
SRS876833 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
SRS876926 SRP056326 Feces C57BL/6 Envigo Laboratory 1 0.00
SRS876825 SRP056326 Feces BALB/c Envigo Laboratory 1 0.00
SRS876781 SRP056326 Feces A/J The Jackson Laboratory Laboratory 1 0.00
ERS2715823 ERP110263 Colon C57BL/6 Envigo Laboratory 1 0.00
ERS2715761 ERP110263 Colon C57BL/6 Envigo Laboratory 1 0.00
SRS876816 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 1 0.00
SRS876828 SRP056326 Feces BALB/c Envigo Laboratory 1 0.00
ERS2716679 ERP110263 Stomach C57BL/6 Envigo Laboratory 1 0.00
ERS2716844 ERP110263 Feces C57BL/6 Envigo Laboratory 1 0.00
SRS876777 SRP056326 Feces A/J Envigo Laboratory 1 0.00
ERS2715893 ERP110263 Colon C57BL/6 Envigo Laboratory 1 0.00
SRS876860 SRP056326 Feces A/J Envigo Laboratory 1 0.00
SRS876815 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 1 0.00
SRS876817 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 1 0.00
SRS876858 SRP056326 Feces A/J Envigo Laboratory 1 0.00
ERS2715825 ERP110263 Colon C57BL/6 Envigo Laboratory 1 0.00
SRS876795 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 1 0.00