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PAC002494_s (Species)

Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; LLKB_g; PAC002494_s;

This taxon was found in 0.67% of laboratory mice cecum, 8.16% of wild mice ileocecum (with ≥1% threshold).

Relative abundance


Relative abundance in each sample

Sample accession Project accession Sampling location Genotype Vendor Origin Count Relative abundance (%)
SRS2290243 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2611 7.30
SRS2290244 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1678 5.95
SRS2290075 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1757 3.89
SRS2290164 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 379 2.68
SRS2290107 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 233 1.97
SRS2290079 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 732 1.48
SRS2290018 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 199 1.39
SRS347294 SRP012588 Cecum A/J The Jackson Laboratory Laboratory 83 1.17
SRS2290099 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 131 1.00
SRS347357 SRP012588 Cecum PWK/PhJ The Jackson Laboratory Laboratory 126 0.94
SRS2290015 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 93 0.86
SRS347353 SRP012588 Cecum PWK/PhJ The Jackson Laboratory Laboratory 88 0.76
SRS2290024 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 80 0.69
SRS2290021 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 74 0.68
SRS2290031 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 92 0.67
SRS347354 SRP012588 Cecum PWK/PhJ The Jackson Laboratory Laboratory 60 0.62
SRS2290050 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 96 0.61
SRS1785895 SRP092663 Feces C57BL/6 The Jackson Laboratory Laboratory 186 0.58
SRS347361 SRP012588 Cecum PWK/PhJ The Jackson Laboratory Laboratory 35 0.46
SRS347336 SRP012588 Cecum NOD/LtJ The Jackson Laboratory Laboratory 43 0.44
SRS2290241 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 122 0.42
SRS2290105 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 84 0.42
SRS2290214 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 54 0.40
SRS2290076 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 137 0.40
SRS347338 SRP012588 Cecum NOD/LtJ The Jackson Laboratory Laboratory 54 0.39
SRS876834 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 274 0.38
SRS2290237 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 35 0.33
SRS876925 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 197 0.31
SRS876815 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 225 0.31
SRS876771 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 189 0.28
SRS1785910 SRP092663 Feces C57BL/6 The Jackson Laboratory Laboratory 92 0.27
SRS2290119 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 29 0.25
SRS2290103 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 25 0.22
SRS2290205 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 76 0.22
SRS347343 SRP012588 Cecum NOD/LtJ The Jackson Laboratory Laboratory 27 0.21
SRS1785898 SRP092663 Feces C57BL/6 The Jackson Laboratory Laboratory 125 0.20
SRS876871 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 157 0.19
SRS876773 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 124 0.18
SRS876908 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 136 0.17
SRS347293 SRP012588 Cecum A/J The Jackson Laboratory Laboratory 11 0.16
SRS876835 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 128 0.16
SRS347295 SRP012588 Cecum A/J The Jackson Laboratory Laboratory 22 0.15
SRS1785943 SRP092663 Feces C57BL/6 The Jackson Laboratory Laboratory 90 0.13
SRS876821 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 74 0.13
SRS2290049 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 10 0.12
SRS347319 SRP012588 Cecum CAST/EiJ The Jackson Laboratory Laboratory 30 0.12
SRS1785930 SRP092663 Feces C57BL/6 The Jackson Laboratory Laboratory 80 0.11
SRS876813 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 75 0.10
SRS4889810 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory 31 0.10
SRS1785899 SRP092663 Feces C57BL/6 The Jackson Laboratory Laboratory 25 0.09
SRS1785909 SRP092663 Feces C57BL/6 The Jackson Laboratory Laboratory 55 0.09
SRS1785926 SRP092663 Feces C57BL/6 The Jackson Laboratory Laboratory 62 0.09
SRS347342 SRP012588 Cecum NOD/LtJ The Jackson Laboratory Laboratory 9 0.09
SRS5679057 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 5 0.07
SRS1785934 SRP092663 Feces C57BL/6 The Jackson Laboratory Laboratory 48 0.07
SRS4889804 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory 20 0.07
SRS4889805 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory 36 0.07
SRS876789 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 36 0.07
SRS347335 SRP012588 Cecum NOD/LtJ The Jackson Laboratory Laboratory 6 0.07
SRS2290202 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 16 0.07
SRS4889809 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory 18 0.07
SRS2290211 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 9 0.06
SRS4889206 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory 17 0.06
SRS1785927 SRP092663 Feces C57BL/6 The Jackson Laboratory Laboratory 40 0.06
SRS876836 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 23 0.05
SRS2290240 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 14 0.05
SRS4889585 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory 15 0.05
SRS876915 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 24 0.05
SRS1785890 SRP092663 Feces C57BL/6 The Jackson Laboratory Laboratory 34 0.05
SRS4889607 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory 12 0.05
SRS4889733 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory 14 0.05
SRS4889273 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory 13 0.05
SRS2290233 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 14 0.05
SRS4889266 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory 20 0.04
SRS4889530 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory 15 0.04
SRS1785888 SRP092663 Feces C57BL/6 The Jackson Laboratory Laboratory 12 0.04
SRS1785925 SRP092663 Feces C57BL/6 The Jackson Laboratory Laboratory 18 0.03
SRS1785915 SRP092663 Feces C57BL/6 The Jackson Laboratory Laboratory 19 0.03
SRS2290198 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 6 0.03
SRS1785913 SRP092663 Feces C57BL/6 The Jackson Laboratory Laboratory 14 0.03
SRS2290200 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 8 0.03
SRS876930 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 3 0.03
SRS876878 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 14 0.02
SRS876906 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 16 0.02
SRS1945766 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 11 0.02
SRS2290165 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.02
SRS876786 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 12 0.02
SRS2290073 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 7 0.02
SRS2290234 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 4 0.02
SRS876810 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 12 0.02
SRS876905 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 14 0.02
SRS2290208 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.02
SRS2290204 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 6 0.02
SRS2290019 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.02
SRS347284 SRP012588 Cecum 129S1/SvImJ The Jackson Laboratory Laboratory 1 0.01
SRS876830 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 7 0.01
SRS4889609 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory 4 0.01
SRS2290206 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3 0.01
SRS876811 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 6 0.01
SRS4889586 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory 2 0.01
SRS2290216 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.01
SRS876882 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 3 0.01
SRS876955 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 4 0.01
SRS876907 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 4 0.01
SRS347334 SRP012588 Cecum NOD/LtJ The Jackson Laboratory Laboratory 1 0.01
SRS2290238 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
SRS1945769 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 2 0.00
SRS4889606 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
SRS2290203 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
SRS876933 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 2 0.00
SRS876934 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 2 0.00
SRS876796 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 2 0.00
SRS4889701 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 1 0.00
SRS2290078 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
SRS2290117 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
SRS2290124 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
SRS2290158 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
SRS4889366 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 1 0.00
SRS1981755 SRP099935 Feces C57BL/6 Animal Resource Centre Laboratory 1 0.00
SRS876847 SRP056326 Feces A/J The Jackson Laboratory Laboratory 1 0.00
SRS2290175 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
SRS876822 SRP056326 Feces BALB/c Envigo Laboratory 1 0.00
SRS876885 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
SRS876807 SRP056326 Feces C57BL/6 Envigo Laboratory 1 0.00
ERS2715946 ERP110263 Cecum C57BL/6 Envigo Laboratory 1 0.00
SRS876953 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
SRS876805 SRP056326 Feces A/J The Jackson Laboratory Laboratory 1 0.00
SRS876869 SRP056326 Feces A/J Envigo Laboratory 1 0.00
SRS876853 SRP056326 Feces A/J Envigo Laboratory 1 0.00
SRS876820 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 1 0.00