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Summary

Project accession Sample accession Experiment accession Run accession Sampling location Genotype Vendor Origin
SRP092663 SRS1785930 SRX2329899 SRR4994721 Feces C57BL/6 The Jackson Laboratory Laboratory
Collection date Country Sex Age Life stage Region Metadata Comment #Valid reads #kegg id
2015-05-20 Canada Female 9 Adult V4 96797 8100

OTU-picking

Method Cutoff No. of OTUs found in the sample Good's coverage of library(%)
CL_OPEN_REF_UCLUST_MC2 0.97 434 99.97

Diversity indices

ACE Chao1 Jackknife Shannon Simpson NPShannon Phylogenetic diversity
447.80 438.23 461.00 3.61 0.06 3.61 500

Rarefaction curve

Rank abundance curve

Bacterial Composition