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PAC001605_s (Species)

Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; PAC001105_g; PAC001605_s;

This taxon was found in 2.0% of laboratory mice cecum, 0.8% of laboratory mice feces, 1.02% of wild mice ileocecum (with ≥1% threshold).

Relative abundance

Relative abundance in each sample

Sample accession Project accession Sampling location Genotype Vendor Origin Count Relative abundance (%)
SRS5679024 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 165 4.47
SRS1872579 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 783 3.63
SRS5679028 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 73 2.04
SRS5679032 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 43 1.37
SRS2290241 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 321 1.10
SRS940678 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 311 1.07
SRS941143 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 243 1.03
SRS5679068 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 51 0.99
ERS1069635 ERP014408 Feces C57BL/6 Envigo Laboratory 441 0.86
SRS5679030 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 27 0.82
SRS5679026 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 41 0.80
ERS2715801 ERP110263 Colon C57BL/6 Envigo Laboratory 420 0.76
SRS1872586 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 146 0.69
SRS5679035 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 34 0.59
ERS2716002 ERP110263 Cecum C57BL/6 Envigo Laboratory 134 0.57
SRS2290202 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 132 0.54
SRS940649 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 118 0.54
SRS5679079 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 25 0.52
ERS2715868 ERP110263 Colon C57BL/6 Envigo Laboratory 197 0.44
SRS1872589 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 68 0.42
ERS2715935 ERP110263 Cecum C57BL/6 Envigo Laboratory 221 0.36
ERS2716722 ERP110263 Stomach C57BL/6 Envigo Laboratory 120 0.28
SRS941212 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 71 0.25
SRS5679034 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 11 0.23
SRS940871 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 30 0.23
ERS2716186 ERP110263 Duodenum C57BL/6 Envigo Laboratory 35 0.20
ERS2716655 ERP110263 Stomach C57BL/6 Envigo Laboratory 96 0.18
ERS2716175 ERP110263 Duodenum C57BL/6 Envigo Laboratory 98 0.16
ERS2716231 ERP110263 Ileum C57BL/6 Envigo Laboratory 25 0.15
SRS5679046 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 5 0.13
ERS2716841 ERP110263 Feces C57BL/6 Envigo Laboratory 85 0.12
SRS1872573 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 20 0.12
SRS5679029 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 5 0.10
SRS2290208 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 11 0.10
ERS2716320 ERP110263 Ileum C57BL/6 Envigo Laboratory 23 0.09
SRS2290216 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 13 0.09
SRS1872571 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 13 0.07
SRS1872567 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 11 0.07
SRS5679077 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 3 0.07
SRS1872600 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 10 0.06
SRS940859 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 13 0.04
SRS5679033 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 1 0.04
SRS941318 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 13 0.04
ERS2715969 ERP110263 Cecum C57BL/6 Envigo Laboratory 21 0.04
ERS2715835 ERP110263 Colon C57BL/6 Envigo Laboratory 15 0.03
ERS2715768 ERP110263 Colon C57BL/6 Envigo Laboratory 20 0.03
ERS2716119 ERP110263 Duodenum C57BL/6 Envigo Laboratory 18 0.03
SRS5679025 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 1 0.02
ERS2716145 ERP110263 Duodenum C57BL/6 Envigo Laboratory 9 0.02
ERS2715902 ERP110263 Cecum C57BL/6 Envigo Laboratory 13 0.02
ERS2715913 ERP110263 Cecum C57BL/6 Envigo Laboratory 14 0.02
ERS2716146 ERP110263 Duodenum C57BL/6 Envigo Laboratory 7 0.02
ERS2716588 ERP110263 Jejunum C57BL/6 Envigo Laboratory 4 0.02
SRS2290159 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.02
ERS2715846 ERP110263 Colon C57BL/6 Envigo Laboratory 8 0.02
SRS941670 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 4 0.02
SRS1872565 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 3 0.01
SRS2290160 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
ERS2716613 ERP110263 Jejunum C57BL/6 Envigo Laboratory 7 0.01
SRS2290204 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 4 0.01
ERS2716622 ERP110263 Stomach C57BL/6 Envigo Laboratory 7 0.01
SRS1872568 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 2 0.01
SRS1872576 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 2 0.01
SRS2290206 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3 0.01
ERS2716521 ERP110263 Jejunum C57BL/6 Envigo Laboratory 6 0.01
ERS2716633 ERP110263 Stomach C57BL/6 Envigo Laboratory 6 0.01
ERS2716387 ERP110263 Jejunum C57BL/6 Envigo Laboratory 4 0.01
ERS2716141 ERP110263 Duodenum C57BL/6 Envigo Laboratory 4 0.01
ERS2716840 ERP110263 Feces C57BL/6 Envigo Laboratory 4 0.01
ERS2715980 ERP110263 Cecum C57BL/6 Envigo Laboratory 3 0.01
ERS2716689 ERP110263 Stomach C57BL/6 Envigo Laboratory 3 0.01
ERS2716013 ERP110263 Cecum C57BL/6 Envigo Laboratory 2 0.01
SRS1872570 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 1 0.01
SRS1872566 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 1 0.01
ERS2716746 ERP110263 Stomach C57BL/6 Envigo Laboratory 2 0.00
SRS1872580 SRP095440 Feces C57BL/6 Shanghai Laboratory Animal Center Laboratory 1 0.00
ERS2715946 ERP110263 Cecum C57BL/6 Envigo Laboratory 3 0.00
ERS2716144 ERP110263 Duodenum C57BL/6 Envigo Laboratory 3 0.00
ERS2716566 ERP110263 Jejunum C57BL/6 Envigo Laboratory 1 0.00
ERS2716479 ERP110263 Jejunum C57BL/6 Envigo Laboratory 1 0.00
ERS2716543 ERP110263 Jejunum C57BL/6 Envigo Laboratory 2 0.00
ERS2716130 ERP110263 Duodenum C57BL/6 Envigo Laboratory 1 0.00
ERS2716612 ERP110263 Jejunum C57BL/6 Envigo Laboratory 2 0.00
ERS2716079 ERP110263 Duodenum C57BL/6 Envigo Laboratory 2 0.00
ERS2715779 ERP110263 Colon C57BL/6 Envigo Laboratory 2 0.00
SRS4889811 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 1 0.00
ERS2716287 ERP110263 Ileum C57BL/6 Envigo Laboratory 1 0.00
SRS876840 SRP056326 Feces C57BL/6 Envigo Laboratory 1 0.00
ERS2716700 ERP110263 Stomach C57BL/6 Envigo Laboratory 1 0.00
SRS876832 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
SRS876810 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
ERS2716843 ERP110263 Feces C57BL/6 Envigo Laboratory 1 0.00
SRS876803 SRP056326 Feces A/J The Jackson Laboratory Laboratory 1 0.00
SRS876771 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 1 0.00
SRS876785 SRP056326 Feces C57BL/6 Envigo Laboratory 1 0.00
SRS876850 SRP056326 Feces A/J The Jackson Laboratory Laboratory 1 0.00
ERS2715924 ERP110263 Cecum C57BL/6 Envigo Laboratory 1 0.00
SRS876805 SRP056326 Feces A/J The Jackson Laboratory Laboratory 1 0.00
ERS2716839 ERP110263 Feces C57BL/6 Envigo Laboratory 1 0.00
SRS876802 SRP056326 Feces A/J The Jackson Laboratory Laboratory 1 0.00
ERS2716842 ERP110263 Feces C57BL/6 Envigo Laboratory 1 0.00
SRS876817 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 1 0.00
SRS876804 SRP056326 Feces A/J The Jackson Laboratory Laboratory 1 0.00
SRS876889 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 1 0.00