Agathobacter

Agathobacter (Genus)

Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Agathobacter;

This taxon was found in 1.02% of wild mice ileocecum (with ≥1% threshold).

Relative abundance

Relative abundance in each sample

Sample accession	Project accession	Sampling location	Genotype	Vendor	Origin	Count	Relative abundance (%)
SRS2290164	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	175	1.22
ERS2716680	ERP110263	Stomach	C57BL/6	Envigo	Laboratory	164	0.26
SRS2290163	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	100	0.25
SRS876879	SRP056326	Feces	C57BL/6	Envigo	Laboratory	136	0.21
SRS2529794	SRP145069	Colon	C57BL/6	Janvier Labs	Laboratory	46	0.14
SRS2529799	SRP145069	Colon	C57BL/6	Janvier Labs	Laboratory	34	0.14
SRS2290234	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	27	0.13
SRS2529800	SRP145069	Colon	C57BL/6	Janvier Labs	Laboratory	28	0.10
SRS2290019	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	11	0.08
SRS2529849	SRP145069	Colon	C57BL/6	Janvier Labs	Laboratory	24	0.08
SRS2290198	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	17	0.08
SRS2529792	SRP145069	Colon	C57BL/6	Janvier Labs	Laboratory	19	0.07
ERS2715779	ERP110263	Colon	C57BL/6	Envigo	Laboratory	51	0.07
SRS2529790	SRP145069	Colon	C57BL/6	Janvier Labs	Laboratory	14	0.07
SRS2290072	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	7	0.05
SRS2290162	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	10	0.05
SRS2529850	SRP145069	Colon	C57BL/6	Janvier Labs	Laboratory	11	0.04
SRS2290039	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	6	0.04
SRS2290244	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	10	0.03
SRS2290107	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	4	0.03
SRS2290020	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	5	0.03
SRS2290202	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	8	0.03
ERS2716622	ERP110263	Stomach	C57BL/6	Envigo	Laboratory	18	0.03
SRS876843	SRP056326	Feces	C57BL/6	Envigo	Laboratory	16	0.03
SRS2529852	SRP145069	Colon	C57BL/6	Janvier Labs	Laboratory	6	0.02
SRS2290023	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	3	0.02
SRS2290242	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	2	0.02
SRS940649	SRP058488	Feces	C57BL/6	Charles River Laboratories	Laboratory	4	0.02
SRS2290208	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	2	0.02
SRS2290119	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	2	0.02
SRS2290243	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	6	0.02
SRS2290075	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	7	0.02
SRS2290099	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	2	0.01
SRS2290167	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	2	0.01
SRS2290211	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	2	0.01
SRS2529848	SRP145069	Colon	C57BL/6	Janvier Labs	Laboratory	3	0.01
SRS2290049	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	1	0.01
SRS2290200	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	3	0.01
SRS876809	SRP056326	Feces	C57BL/6	Envigo	Laboratory	6	0.01
SRS2290175	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	5	0.01
SRS2290061	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	1	0.01
SRS1945766	SRP098151	Feces	C57BL/6	The Jackson Laboratory	Laboratory	4	0.01
SRS940871	SRP058488	Feces	C57BL/6	Charles River Laboratories	Laboratory	1	0.01
SRS2290055	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	1	0.01
SRS3667853	SRP157514	Feces	C57BL/6	Charles River Laboratories	Laboratory	2	0.01
SRS876903	SRP056326	Feces	C57BL/6	Envigo	Laboratory	3	0.01
SRS876926	SRP056326	Feces	C57BL/6	Envigo	Laboratory	3	0.00
SRS2290207	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	2	0.00
SRS876927	SRP056326	Feces	C57BL/6	Envigo	Laboratory	3	0.00
SRS876784	SRP056326	Feces	C57BL/6	Envigo	Laboratory	3	0.00
ERS2716024	ERP110263	Cecum	C57BL/6	Envigo	Laboratory	2	0.00
SRS941670	SRP058488	Feces	C57BL/6	Charles River Laboratories	Laboratory	1	0.00
SRS2290240	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	1	0.00
SRS876840	SRP056326	Feces	C57BL/6	Envigo	Laboratory	2	0.00
SRS876944	SRP056326	Feces	A/J	Envigo	Laboratory	2	0.00
SRS2290241	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	1	0.00
ERS2716175	ERP110263	Duodenum	C57BL/6	Envigo	Laboratory	2	0.00
SRS876867	SRP056326	Feces	A/J	Envigo	Laboratory	2	0.00
SRS876880	SRP056326	Feces	C57BL/6	Envigo	Laboratory	2	0.00
SRS876877	SRP056326	Feces	C57BL/6	Envigo	Laboratory	2	0.00
SRS876955	SRP056326	Feces	C57BL/6	The Jackson Laboratory	Laboratory	2	0.00
SRS2290117	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	1	0.00
SRS4889617	SRP200540	Cecum	Mus musculus domesticus	Wild mouse	Wild	1	0.00
ERS2716689	ERP110263	Stomach	C57BL/6	Envigo	Laboratory	1	0.00
SRS1981754	SRP099935	Feces	C57BL/6	Animal Resource Centre	Laboratory	1	0.00
SRS876814	SRP056326	Feces	BALB/c	The Jackson Laboratory	Laboratory	1	0.00
SRS2063205	SRP102269	Feces	C57BL/6	National Laboratory Animal Center	Laboratory	1	0.00
SRS876896	SRP056326	Feces	A/J	Envigo	Laboratory	1	0.00
SRS876891	SRP056326	Feces	A/J	Envigo	Laboratory	1	0.00
SRS876785	SRP056326	Feces	C57BL/6	Envigo	Laboratory	1	0.00
SRS2063201	SRP102269	Feces	C57BL/6	National Laboratory Animal Center	Laboratory	1	0.00
SRS876890	SRP056326	Feces	BALB/c	The Jackson Laboratory	Laboratory	1	0.00