Project accession | Sample accession | Experiment accession | Run accession | Sampling location | Genotype | Vendor | Origin |
---|---|---|---|---|---|---|---|
SRP157514 | SRS3667903 | SRX4550797 | SRR7691184 | Cecum | C57BL/6 | Charles River Laboratories | Laboratory |
Collection date | Country | Sex | Age | Life stage | Region | Metadata | Comment | #Valid reads | #kegg id |
---|---|---|---|---|---|---|---|---|---|
Male | 14 | Adult | V4 | 34135 | 8681 |
Method | Cutoff | No. of OTUs found in the sample | Good's coverage of library(%) |
---|---|---|---|
CL_OPEN_REF_UCLUST_MC2 | 0.97 | 510 | 99.84 |
ACE | Chao1 | Jackknife | Shannon | Simpson | NPShannon | Phylogenetic diversity |
---|---|---|---|---|---|---|
540.27 | 524.66 | 563.00 | 4.26 | 0.04 | 4.28 | 628 |