Project accession Sample accession Experiment accession Run accession Sampling location Genotype Vendor Origin
SRP157514 SRS3665236 SRX4547967 SRR7687467 Feces C57BL/6 Charles River Laboratories Laboratory
Collection date Country Sex Age Life stage Region Metadata Comment #Valid reads #kegg id
2016-01-04 Male 8 Adult V4 33925 9158


Method Cutoff No. of OTUs found in the sample Good's coverage of library(%)
CL_OPEN_REF_UCLUST_MC2 0.97 509 99.73

Diversity indices

ACE Chao1 Jackknife Shannon Simpson NPShannon Phylogenetic diversity
572.73 534.03 599.00 3.63 0.06 3.66 583

Rarefaction curve

Rank abundance curve

Bacterial Composition