Project accession Sample accession Experiment accession Run accession Sampling location Genotype Vendor Origin
SRP157514 SRS3665202 SRX4547933 SRR7687501 Cecum C57BL/6 Charles River Laboratories Laboratory
Collection date Country Sex Age Life stage Region Metadata Comment #Valid reads #kegg id
2016-02-24 Male 14 Adult V4 27529 8576


Method Cutoff No. of OTUs found in the sample Good's coverage of library(%)
CL_OPEN_REF_UCLUST_MC2 0.97 497 99.74

Diversity indices

ACE Chao1 Jackknife Shannon Simpson NPShannon Phylogenetic diversity
545.24 517.78 569.00 4.20 0.03 4.22 584

Rarefaction curve

Rank abundance curve

Bacterial Composition