Summary
| Project accession |
Sample accession |
Experiment accession |
Run accession |
Sampling location |
Genotype |
Vendor |
Origin |
| SRP099935 |
SRS1981753 |
SRX2565166 |
SRR5260624 |
Feces |
C57BL/6 |
Animal Resource Centre |
Laboratory |
| Collection date |
Country |
Sex |
Age |
Life stage |
Region |
Metadata |
Comment |
#Valid reads |
#kegg id |
| 2015-09-01 |
Australia |
Female |
20 |
Adult |
V4 |
|
|
64729 |
9442 |
OTU-picking
| Method |
Cutoff |
No. of OTUs found in the sample |
Good's coverage of library(%) |
| CL_OPEN_REF_UCLUST_MC2 |
0.97 |
493 |
99.88 |
Diversity indices
| ACE |
Chao1 |
Jackknife |
Shannon |
Simpson |
NPShannon |
Phylogenetic diversity |
| 561.29 |
528.01 |
572.00 |
3.91 |
0.07 |
3.92 |
645 |
Rarefaction curve
Rank abundance curve
Bacterial Composition
